RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 DHRS4L2Q6PKH6 230 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 ZNF566Q969W8 418 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 FAM234AQ9H0X4 552 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 ERVMER34-1Q9H9K5 563 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 MYOTQ9UBF9 498 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 NXPH3O95157 252 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 OTX2P32243 289 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 KIAA1024LP59773 190 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 ACSM1Q08AH1 577 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 OR7A5Q15622 319 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 PXDC1Q5TGL8 231 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 PRICKLE2Q7Z3G6 844 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 HSD17B11Q8NBQ5 300 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 ZBTB44Q8NCP5 570 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 SMIM14Q96QK8 99 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 SERINC2Q96SA4 455 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 GABARAPL3Q9BY60 117 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 ENKD1Q9H0I2 346 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 GNG12Q9UBI6 72 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 PMP2P02689 132 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 SLC35A2P78381 396 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 IKZF1Q13422 519 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 Q1RN00 199 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 TMEM244Q5VVB8 128 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 NECAP1Q8NC96 275 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 KLHDC9Q8NEP7 349 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 LKAAEAR1Q8TD35 194 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 NEURL3Q96EH8 262 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 TACR3P29371 465 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 HNRNPA3P51991 378 aaKnown RBP9.13□□□□□ -0.95
COL6A3-201ENST00000295550 CTSCP53634 463 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 SBK3P0C264 359 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 SPI1P17947 270 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 MRPL19P49406 292 aaKnown RBP9.13□□□□□ -0.95
COL6A3-201ENST00000295550 COTL1Q14019 142 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 TMEM25Q86YD3 366 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 SUMF1Q8NBK3 374 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 SFXN2Q96NB2 322 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 NPIPA5A0A0B4J1W7 369 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 GPR18Q14330 331 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 HAGHQ16775 308 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 IER5LQ5T953 404 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 ZNF765Q7L2R6 523 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 TCTE3Q8IZS6 198 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 SLC22A11Q9NSA0 550 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 TMEM269A0A1B0GVZ9 245 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 OR5H15A6NDH6 313 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 OR5H14A6NHG9 310 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 OR5H1A6NKK0 313 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 PMS2P2O95744 297 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 OLFM2O95897 454 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 CTSAP10619 480 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 DPP4P27487 766 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 SLC46A3Q7Z3Q1 461 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 CLDN22Q8N7P3 220 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 ELOVL3Q9HB03 270 aa9.13□□□□□ -0.95
COL6A3-201ENST00000295550 TCRBV21S2A2A0A5A6 115 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 A6NCN8 305 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 OR5K4A6NMS3 321 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 ZNF728P0DKX0 622 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 CDRT4Q8N9R6 151 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 OR2G3Q8NGZ4 309 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 OR51I2Q9H344 312 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 A0A1W2PP55 124 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 SLC9B1P1A6NJY1 282 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 RNGTTO60942 597 aaKnown RBP9.12□□□□□ -0.95
COL6A3-201ENST00000295550 MAKP20794 623 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 HNF1AP20823 631 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 HTR2CP28335 458 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 OR13C2Q8NGS9 318 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 CLSTN3Q9BQT9 956 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 SLC22A7Q9Y694 548 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 SNCGO76070 127 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 TIMP2P16035 220 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 VIPR2P41587 438 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 P2RX3P56373 397 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 FCN2Q15485 313 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 SEC22AQ96IW7 307 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 OR7D2Q96RA2 312 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 PARP12Q9H0J9 701 aaKnown RBP9.12□□□□□ -0.95
COL6A3-201ENST00000295550 PDFQ9HBH1 243 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 OBP2BQ9NPH6 170 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 KPTNQ9Y664 436 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 GSK3AP49840 483 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 ADPRMQ3LIE5 342 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 COL13A1Q5TAT6 717 aaPredicted RBP9.12□□□□□ -0.95
COL6A3-201ENST00000295550 CD276Q5ZPR3 534 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 ZNF816-ZNF321PA0A0X1KG74 233 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 G3V3Q6 166 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 SLCO2B1O94956 709 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 NPY4RP50391 375 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 ZNF239Q16600 458 aaKnown RBP9.12□□□□□ -0.95
COL6A3-201ENST00000295550 ZNF321PQ8N8H1 164 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 OR4F5Q8NH21 305 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 OR5K2Q8NHB8 316 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 OR4F4Q96R69 305 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 SORBS1Q9BX66 1292 aaKnown RBP9.12□□□□□ -0.95
COL6A3-201ENST00000295550 ISYNA1Q9NPH2 558 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 SLC2A8Q9NY64 477 aa9.12□□□□□ -0.95
COL6A3-201ENST00000295550 CST6Q15828 149 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms