RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 NMBP08949 121 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 NANOS3P60323 173 aaKnown RBP12.22□□□□□ -0.45
SCAF4-201ENST00000286835 EIF2B1Q14232 305 aaKnown RBP12.22□□□□□ -0.45
SCAF4-201ENST00000286835 RNASE10Q5GAN6 216 aaKnown RBP12.22□□□□□ -0.45
SCAF4-201ENST00000286835 ZNF101Q8IZC7 436 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 SYS1Q8N2H4 156 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 SLC2A12Q8TD20 617 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 VRK1Q99986 396 aaPredicted RBP12.22□□□□□ -0.45
SCAF4-201ENST00000286835 CHST6Q9GZX3 395 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 ZNF768Q9H5H4 540 aaKnown RBP12.22□□□□□ -0.45
SCAF4-201ENST00000286835 C12orf10Q9HB07 376 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 SLC2A4RGQ9NR83 387 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 MBD2Q9UBB5 411 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 SLC22A13Q9Y226 551 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 PCDHGA9Q9Y5G4 932 aaKnown RBP12.22□□□□□ -0.45
SCAF4-201ENST00000286835 NDUFB6O95139 128 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 S100A6P06703 90 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 RAG2P55895 527 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 DCAF12L2Q5VW00 463 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 GLT8D1Q68CQ7 371 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 FBXO42Q6P3S6 717 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 HAVCR1Q96D42 359 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 PRTFDC1Q9NRG1 225 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 SCN5AQ14524 2016 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 AIMP2Q13155 320 aaKnown RBP12.22□□□□□ -0.45
SCAF4-201ENST00000286835 GPR18Q14330 331 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 GTPBP8Q8N3Z3 284 aaPredicted RBP12.22□□□□□ -0.45
SCAF4-201ENST00000286835 ZNF649Q9BS31 505 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 TMEM231Q9H6L2 316 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 C2orf42Q9NWW7 574 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 SOX1O00570 391 aaPredicted RBP12.22□□□□□ -0.45
SCAF4-201ENST00000286835 ZNF823P16415 610 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 DRD3P35462 400 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 ACTBP60709 375 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 PRPS1P60891 318 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 ACTG1P63261 375 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 DND1Q8IYX4 353 aaKnown RBP12.22□□□□□ -0.45
SCAF4-201ENST00000286835 OR51A4Q8NGJ6 313 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 OR1E3Q8WZA6 343 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 MIB2Q96AX9 1013 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 FAM3DQ96BQ1 224 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 ZBTB8AQ96BR9 441 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 KLHL15Q96M94 604 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 INTS14Q96SY0 518 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 GPER1Q99527 375 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 TMEM74BQ9NUR3 256 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 GLS2Q9UI32 602 aa12.22□□□□□ -0.45
SCAF4-201ENST00000286835 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 A0A0B4J2E0 115 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 A0A1B0GX12 115 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 GLCEO94923 617 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 PEBP1P30086 187 aaKnown RBP12.21□□□□□ -0.45
SCAF4-201ENST00000286835 AGTR1P30556 359 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 S100A10P60903 97 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 MEP1BQ16820 701 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 GLYATL3Q5SZD4 288 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 AGBL4Q5VU57 503 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 ZNF626Q68DY1 528 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 ZFP82Q8N141 532 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 FAM71CQ8NEG0 241 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 SLC25A38Q96DW6 304 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 HDAC8Q9BY41 377 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 EMC3Q9P0I2 261 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 SLC22A7Q9Y694 548 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 PIN1P1O15428 100 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 BRINP1O60477 761 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 SLC16A7O60669 478 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 HHEXQ03014 270 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 DPY19L2P2Q6ZN68 376 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 PXKQ7Z7A4 578 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 GPAT4Q86UL3 456 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 PM20D2Q8IYS1 436 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 ZNF248Q8NDW4 579 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 TMEM52Q8NDY8 209 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 OR4C3Q8NH37 302 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 C2CD4CQ8TF44 421 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 C5orf34Q96MH7 638 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 TGM7Q96PF1 710 aa12.21□□□□□ -0.45
SCAF4-201ENST00000286835 S100A9P06702 114 aaKnown RBP12.21□□□□□ -0.46
SCAF4-201ENST00000286835 HOXD4P09016 255 aaPredicted RBP12.21□□□□□ -0.46
SCAF4-201ENST00000286835 IGFALSP35858 605 aa12.21□□□□□ -0.46
SCAF4-201ENST00000286835 SNRPNP63162 240 aaKnown RBP12.21□□□□□ -0.46
SCAF4-201ENST00000286835 CRIPAKQ8N1N5 446 aa12.21□□□□□ -0.46
SCAF4-201ENST00000286835 SLC25A44Q96H78 314 aaPredicted RBP12.21□□□□□ -0.46
SCAF4-201ENST00000286835 ADOQ96SZ5 270 aa12.21□□□□□ -0.46
SCAF4-201ENST00000286835 G6PC3Q9BUM1 346 aa12.21□□□□□ -0.46
SCAF4-201ENST00000286835 STEAP1Q9UHE8 339 aa12.21□□□□□ -0.46
SCAF4-201ENST00000286835 OPN4Q9UHM6 478 aa12.21□□□□□ -0.46
SCAF4-201ENST00000286835 ZNF223Q9UK11 482 aaPredicted RBP12.21□□□□□ -0.46
SCAF4-201ENST00000286835 ANKRD20A5PA0PJZ0 165 aa12.2□□□□□ -0.46
SCAF4-201ENST00000286835 SLC22A23A1A5C7 686 aa12.2□□□□□ -0.46
SCAF4-201ENST00000286835 C2orf74A8MZ97 194 aa12.2□□□□□ -0.46
SCAF4-201ENST00000286835 VSIG10L2P0DP72 767 aa12.2□□□□□ -0.46
SCAF4-201ENST00000286835 GABRA1P14867 456 aa12.2□□□□□ -0.46
SCAF4-201ENST00000286835 ITGA3P26006 1051 aa12.2□□□□□ -0.46
SCAF4-201ENST00000286835 IL13RA1P78552 427 aa12.2□□□□□ -0.46
SCAF4-201ENST00000286835 TOMM20Q15388 145 aa12.2□□□□□ -0.46
SCAF4-201ENST00000286835 SLC6A19Q695T7 634 aa12.2□□□□□ -0.46
SCAF4-201ENST00000286835 FAM199XQ6PEV8 388 aaPredicted RBP12.2□□□□□ -0.46
SCAF4-201ENST00000286835 CDH26Q8IXH8 852 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms