RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 CNOT1A5YKK6 2376 aaKnown RBP9.44□□□□□ -0.9
SKA1-201ENST00000285116 NPIPA5A0A0B4J1W7 369 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 A0A0D9SG52 128 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 MCIDASD6RGH6 385 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 NPIPA7E9PJI5 369 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 NARSO43776 548 aaKnown RBP9.44□□□□□ -0.9
SKA1-201ENST00000285116 EIF4E2O60573 245 aaKnown RBP9.44□□□□□ -0.9
SKA1-201ENST00000285116 ZNF254O75437 659 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 IFNA4P05014 189 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 GYPBP06028 91 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 GP1BAP07359 652 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 TACSTD2P09758 323 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 NPIPA8P0DM63 369 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 PVALBP20472 110 aaPredicted RBP9.44□□□□□ -0.9
SKA1-201ENST00000285116 PTNP21246 168 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 AGTR1P30556 359 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 SORDQ00796 357 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 PSG6Q00889 435 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 NDUFAF6Q330K2 333 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 ELP2Q6IA86 826 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 SLC16A9Q7RTY1 509 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 ARHGEF39Q8N4T4 335 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 SYNPRQ8TBG9 265 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 GRHL3Q8TE85 626 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 TNFAIP8L1Q8WVP5 186 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 OR1E3Q8WZA6 343 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 RERGQ96A58 199 aaPredicted RBP9.44□□□□□ -0.9
SKA1-201ENST00000285116 C2orf42Q9NWW7 574 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 ERVK-19Q9WJR5 959 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 IER3IP1Q9Y5U9 82 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 EML5Q05BV3 1969 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 CACNA1HO95180 2353 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 TRBV5-7A0A0A0MS05 114 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 H0YGG7 62 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 RFC3P40938 356 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 KIR2DL1P43626 348 aaPredicted RBP9.44□□□□□ -0.9
SKA1-201ENST00000285116 ARF3P61204 181 aaPredicted RBP9.44□□□□□ -0.9
SKA1-201ENST00000285116 STX4Q12846 297 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 TOMM20Q15388 145 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 DCAF12L2Q5VW00 463 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 C11orf88Q6PI97 169 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 KIRREL2Q6UWL6 708 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 MUC20Q8N307 709 aaPredicted RBP9.44□□□□□ -0.9
SKA1-201ENST00000285116 OR4K13Q8NH42 304 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 VSTM2LQ96N03 204 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 G6PC3Q9BUM1 346 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 ZNF768Q9H5H4 540 aaKnown RBP9.44□□□□□ -0.9
SKA1-201ENST00000285116 OR5V1Q9UGF6 321 aa9.44□□□□□ -0.9
SKA1-201ENST00000285116 FAM25EA8MYX2 175 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 ABHD16AO95870 558 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 RLN1P04808 185 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 MELTFP08582 738 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 ADH7P40394 386 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 SEC13P55735 322 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 TAS2R20P59543 309 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 EXOSC7Q15024 291 aaKnown RBP9.43□□□□□ -0.9
SKA1-201ENST00000285116 ZNHIT3Q15649 155 aaPredicted RBP9.43□□□□□ -0.9
SKA1-201ENST00000285116 ZNF528Q3MIS6 628 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 Q499Y3 187 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 IGSF11Q5DX21 431 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 PRRT3Q5FWE3 981 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 PGAP1Q75T13 922 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 KRT77Q7Z794 578 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 LRRTM1Q86UE6 522 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 ARL14Q8N4G2 192 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 TMEM185AQ8NFB2 350 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 WDR92Q96MX6 357 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 ZNF576Q9H609 170 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 TAS2R8Q9NYW2 309 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 MRPS2Q9Y399 296 aaKnown RBP9.43□□□□□ -0.9
SKA1-201ENST00000285116 ZFHX4Q86UP3 3567 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 FANCMQ8IYD8 2048 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 RAB19A4D1S5 217 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 OR6C68A6NDL8 312 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 GLSO94925 669 aaPredicted RBP9.43□□□□□ -0.9
SKA1-201ENST00000285116 IGKV1D-16P01601 117 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 CDK2P24941 298 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 FNTBP49356 437 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.43□□□□□ -0.9
SKA1-201ENST00000285116 EMC4Q5J8M3 183 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 FAM74A1Q5RGS3 127 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 TANGO2Q6ICL3 276 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 STAC2Q6ZMT1 411 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 LDLRAD3Q86YD5 345 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 DND1Q8IYX4 353 aaKnown RBP9.43□□□□□ -0.9
SKA1-201ENST00000285116 PUSL1Q8N0Z8 303 aaKnown RBP9.43□□□□□ -0.9
SKA1-201ENST00000285116 ARMC10Q8N2F6 343 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 ZNF433Q8N7K0 673 aaPredicted RBP9.43□□□□□ -0.9
SKA1-201ENST00000285116 FRMD1Q8N878 549 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 LRRC75AQ8NAA5 344 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 OR52R1Q8NGF1 315 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 PHYHIPLQ96FC7 376 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 HSPA12BQ96MM6 686 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 PTCHD1Q96NR3 888 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 PDCD1LG2Q9BQ51 273 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 SLITRK2Q9H156 845 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 TMEM138Q9NPI0 162 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 SLC17A5Q9NRA2 495 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 POT1Q9NUX5 634 aa9.43□□□□□ -0.9
SKA1-201ENST00000285116 HIF3AQ9Y2N7 669 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms