RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 DPP4P27487 766 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 RAD52P43351 418 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 MECP2P51608 486 aaKnown RBP16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 MAP2K6P52564 334 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 HCCSP53701 268 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 CCL7P80098 99 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 ZNF141Q15928 474 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 ALG10BQ5I7T1 473 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 FAM122CQ6P4D5 195 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 C7orf57Q8NEG2 295 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 OR2A7Q96R45 310 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 TNFRSF13CQ96RJ3 184 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 KLHDC3Q9BQ90 382 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 SEC22CQ9BRL7 303 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 ZNF768Q9H5H4 540 aaKnown RBP16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 GAREM1Q9H706 876 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 MCCC2Q9HCC0 563 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 ING1Q9UK53 422 aaPredicted RBP16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 A0A1B0GX78 115 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 OIP5O43482 229 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 GMFGO60234 142 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 CREBL2O60519 120 aaPredicted RBP16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 DDAH2O95865 285 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 CSTAP01040 98 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 NAT1P18440 290 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 CD226Q15762 336 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 KLHL15Q96M94 604 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 OR1F2PQ96R84 312 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 G6PC3Q9BUM1 346 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 NUDT9Q9BW91 350 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 NOX4Q9NPH5 578 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 C12orf4Q9NQ89 552 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 SLC22A11Q9NSA0 550 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 ZNF69Q9UC07 566 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 GNG8Q9UK08 70 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 BDP1A6H8Y1 2624 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 IGHV3-20A0A0C4DH32 117 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 OR2M5A3KFT3 312 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 MAGEB4O15481 346 aaPredicted RBP16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 LAMTOR5O43504 91 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 NUP62P37198 522 aaPredicted RBP16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 RBM34P42696 430 aaKnown RBP16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 PSMA6P60900 246 aaKnown RBP16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 HES5Q5TA89 166 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 ZNF626Q68DY1 528 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 TMEM81Q6P7N7 255 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 OR52E2Q8NGJ4 325 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 ZNF721Q8TF20 911 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 C15orf40Q8WUR7 153 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 MVB12AQ96EY5 273 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 S100A16Q96FQ6 103 aaKnown RBP16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 GFI1Q99684 422 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 VN1R1Q9GZP7 353 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 CA10Q9NS85 328 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 ANKRD10Q9NXR5 420 aa16.61■□□□□ 0.25
PDLIM3-201ENST00000284767 GDF9O60383 454 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 B3GALNT1O75752 331 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 RAB40ALP0C0E4 278 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 FHL1Q13642 323 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 RGS7BPQ6MZT1 257 aaPredicted RBP16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 TMEM71Q6P5X7 295 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 CBLN3Q6UW01 205 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 OVCH2Q7RTZ1 564 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 OR14A16Q8NHC5 309 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 THEM6Q8WUY1 208 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 RAB40AQ8WXH6 277 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 LINC00052Q96N35 136 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 PDCD1LG2Q9BQ51 273 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 ZNF426Q9BUY5 554 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 PRODH2Q9UF12 536 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 CHRNA9Q9UGM1 479 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 MMACHCQ9Y4U1 282 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 TNRC6BQ9UPQ9 1833 aaKnown RBP16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 NCOR1O75376 2440 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 CCDC163A0A0D9SF12 145 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 SERINC4A6NH21 518 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 KRBOX1C9JBD0 128 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 MCRIP1C9JLW8 97 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 TSPAN4O14817 238 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 TSPAN9O75954 239 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 IGKV3-11P04433 115 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 PTH2RP49190 550 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 LGALS3BPQ08380 585 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 LPAL2Q16609 132 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 FCRLAQ7L513 359 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 WDR5BQ86VZ2 330 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 GCDHQ92947 438 aaPredicted RBP16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 ZNF524Q96C55 264 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 OR6C1Q96RD1 312 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 ADOQ96SZ5 270 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 RTN4RQ9BZR6 473 aa16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 PRMT8Q9NR22 394 aaPredicted RBP16.6■□□□□ 0.25
PDLIM3-201ENST00000284767 TCRBV16S1A1N1A0A5B0 115 aa16.59■□□□□ 0.25
PDLIM3-201ENST00000284767 PIN1P1O15428 100 aa16.59■□□□□ 0.25
PDLIM3-201ENST00000284767 HOXA6P31267 233 aa16.59■□□□□ 0.25
PDLIM3-201ENST00000284767 MNDAP41218 407 aa16.59■□□□□ 0.25
PDLIM3-201ENST00000284767 B3GNTL1Q67FW5 361 aaPredicted RBP16.59■□□□□ 0.25
PDLIM3-201ENST00000284767 CARFQ8N187 725 aa16.59■□□□□ 0.25
PDLIM3-201ENST00000284767 SDR9C7Q8NEX9 313 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms