RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 CCL19Q99731 98 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 KCNN2Q9H2S1 579 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 OR52D1Q9H346 318 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 LIME1Q9H400 295 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 SEC61A2Q9H9S3 476 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 ZNF556Q9HAH1 456 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 OBP2BQ9NPH6 170 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 VNN3Q9NY84 501 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 NPAP1Q9NZP6 1156 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 SIGLEC7Q9Y286 467 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 IER3IP1Q9Y5U9 82 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 SLC25A15Q9Y619 301 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 ATP23Q9Y6H3 246 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 USP9XQ93008 2570 aaPredicted RBP5.72□□□□□ -1.49
CD44-204ENST00000279452 DIDO1Q9BTC0 2240 aaKnown RBP5.72□□□□□ -1.49
CD44-204ENST00000279452 RP1L1Q8IWN7 2480 aaPredicted RBP5.72□□□□□ -1.49
CD44-204ENST00000279452 HCFC1P51610 2035 aa5.72□□□□□ -1.49
CD44-204ENST00000279452 ARPC4-TTLL3A0A0A6YYG9 625 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 TCRBV3S1A0A5B6 114 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 DPRXA6NFQ7 191 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 ATP6V1G2-DDX39BF2Z307 99 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 H3BN98 237 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 RPL36A-HNRNPH2H7BZ11 118 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 DEAF1O75398 565 aaPredicted RBP5.71□□□□□ -1.5
CD44-204ENST00000279452 UBL3O95164 117 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 IGHMP01871 453 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 CRYAAP02489 173 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 RAF1P04049 648 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 OR8G3PP0DMU2 310 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 HOXB1P14653 301 aaPredicted RBP5.71□□□□□ -1.5
CD44-204ENST00000279452 HOXB6P17509 224 aaKnown RBP5.71□□□□□ -1.5
CD44-204ENST00000279452 PTAFRP25105 342 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 CD40P25942 277 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 POU1F1P28069 291 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 SDHAP31040 664 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 CDAP32320 146 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 GIPRP48546 466 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 IST1P53990 364 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 HSF2Q03933 536 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 TSPAN31Q12999 210 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 MICAQ29983 383 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 MESTQ5EB52 335 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 SLC35F1Q5T1Q4 408 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 ARMC4Q5T2S8 1044 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 C1orf94Q6P1W5 598 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 TMEM53Q6P2H8 277 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 LEG1Q6P5S2 330 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 VHLLQ6RSH7 139 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 PAMR1Q6UXH9 720 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 THSD4Q6ZMP0 1018 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 DPY19L2P2Q6ZN68 376 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 ZNF620Q6ZNG0 422 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 SLC16A14Q7RTX9 510 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 MDP1Q86V88 176 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 SLC22A24Q8N4F4 322 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 ARIH2OSQ8N7S6 290 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 ATG16L2Q8NAA4 619 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 LRRC75AQ8NAA5 344 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 OR4C15Q8NGM1 316 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 TEX47Q8TBZ9 253 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 FNDC8Q8TC99 324 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 GIPC3Q8TF64 312 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 BCL2L2Q92843 193 aaPredicted RBP5.71□□□□□ -1.5
CD44-204ENST00000279452 NEUROG1Q92886 237 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 FBXW5Q969U6 566 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 SAMD8Q96LT4 415 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 FOXN4Q96NZ1 517 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 SLC38A2Q96QD8 506 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 RAB3IPQ96QF0 476 aaPredicted RBP5.71□□□□□ -1.5
CD44-204ENST00000279452 GPA33Q99795 319 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 SH3GL3Q99963 347 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 FUZQ9BT04 418 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 ALG12Q9BV10 488 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 NELFAQ9H3P2 528 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 EGLN3Q9H6Z9 239 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 CCNB1IP1Q9NPC3 277 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 TMEM38BQ9NVV0 291 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 PDP1Q9P0J1 537 aaPredicted RBP5.71□□□□□ -1.5
CD44-204ENST00000279452 DNAJB9Q9UBS3 223 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 ST6GALNAC2Q9UJ37 374 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 MOKQ9UQ07 419 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 MGAT4BQ9UQ53 548 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 POLR1DQ9Y2S0 133 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 MED12LQ86YW9 2145 aa5.71□□□□□ -1.5
CD44-204ENST00000279452 LRRK2Q5S007 2527 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 IGHV1-18A0A0C4DH31 117 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 A0A1W2PPR1 153 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 FAM221AA4D161 298 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 PRSS37A4D1T9 235 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 NPIPB13A6NJU9 1138 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 CENPBD1B2RD01 187 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 NPIPB4C9JG80 1138 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 HS3ST1O14792 307 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 SLC16A7O60669 478 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 RENP00797 406 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 GASTP01350 101 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 HLA-DQA2P01906 255 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 CELA3BP08861 270 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 TSPAN19P0C672 248 aa5.7□□□□□ -1.5
CD44-204ENST00000279452 CECR9P0C854 216 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms