RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 HOXA1P49639 335 aaPredicted RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 ATPAF1Q5TC12 328 aaPredicted RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 TMEM71Q6P5X7 295 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 GLIPR1L1Q6UWM5 242 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 ANGPTL5Q86XS5 388 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 SLC22A24Q8N4F4 322 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 OR11L1Q8NGX0 322 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 ZFPM2Q8WW38 1151 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 GIMAP5Q96F15 307 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 FER1L6-AS2Q96M78 137 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 GPR78Q96P69 363 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 TPRP12270 2363 aaKnown RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 MAGEB4O15481 346 aaPredicted RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 TMPRSS11DO60235 418 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 SRMP19623 302 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 SLC19A1P41440 591 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 CATR1Q13166 79 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 FCN2Q15485 313 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 ESCO2Q56NI9 601 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 CORO6Q6QEF8 472 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 PTRH1Q86Y79 214 aaKnown RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 ZNF784Q8NCA9 323 aaPredicted RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 CCDC74AQ96AQ1 378 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 RAB39BQ96DA2 213 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 DAZAP1Q96EP5 407 aaKnown RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 EMC7Q9NPA0 242 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 GLTPQ9NZD2 209 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 LHX6Q9UPM6 363 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 MMACHCQ9Y4U1 282 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 CORINQ9Y5Q5 1042 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 M0R082 166 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 LCMT2O60294 686 aaKnown RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 NFYAP23511 347 aaPredicted RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 TRHRP34981 398 aaPredicted RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 RPS27P42677 84 aaKnown RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 TSFMP43897 325 aaKnown RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 MTNR1BP49286 362 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 RRADP55042 308 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 TAS2R30P59541 319 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 SSTP61278 116 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 AKR1C1Q04828 323 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 CAMK2BQ13554 666 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 ZNF169Q14929 603 aaPredicted RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 ZNF468Q5VIY5 522 aaPredicted RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 RPS19BP1Q86WX3 136 aaKnown RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 ADGRF3Q8IZF5 1079 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 SMAP2Q8WU79 429 aaPredicted RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 KCTD12Q96CX2 325 aaKnown RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 SLC35A4Q96G79 324 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 RBFOX1Q9NWB1 397 aaKnown RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 FGF17O60258 216 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 TCRBP04435 133 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 GUSBP08236 651 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 ZNF728P0DKX0 622 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 AGFG1P52594 562 aaKnown RBP10.53□□□□□ -0.72
USP53-201ENST00000274030 BTG2P78543 158 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 ZNF454Q8N9F8 522 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 FAM174AQ8TBP5 190 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 BCL7CQ8WUZ0 217 aaPredicted RBP10.53□□□□□ -0.72
USP53-201ENST00000274030 NKX3-1Q99801 234 aaPredicted RBP10.53□□□□□ -0.72
USP53-201ENST00000274030 SEC22CQ9BRL7 303 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 SAMD10Q9BYL1 202 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 NXT1Q9UKK6 140 aaKnown RBP10.53□□□□□ -0.72
USP53-201ENST00000274030 RPS2P15880 293 aaKnown RBP10.53□□□□□ -0.72
USP53-201ENST00000274030 ZNF385BQ569K4 471 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 HIST2H3PS2Q5TEC6 136 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 HACD4Q5VWC8 232 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 ACOXLQ9NUZ1 547 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 C1orf123Q9NWV4 160 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 CHD2O14647 1828 aaKnown RBP10.53□□□□□ -0.72
USP53-201ENST00000274030 UBR2Q8IWV8 1755 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 A0A1W2PNR3 127 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 SULT1C2O00338 296 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 HSD17B6O14756 317 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 UBL3O95164 117 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 PAPLNO95428 1278 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 HOXD12P35452 270 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 HSD17B7P56937 341 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 OPCMLQ14982 345 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 TMEM240Q5SV17 173 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 KDM4DQ6B0I6 523 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 PAQR6Q6TCH4 344 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 PGAP1Q75T13 922 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 FCRL1Q96LA6 429 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 HS3ST3A1Q9Y663 406 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 HMGN4O00479 90 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 HS3ST1O14792 307 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 FCMRO60667 390 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 EIF1BO60739 113 aaKnown RBP10.53□□□□□ -0.72
USP53-201ENST00000274030 ST6GAL1P15907 406 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 RPS19P39019 145 aaKnown RBP10.53□□□□□ -0.72
USP53-201ENST00000274030 BAXQ07812 192 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 AFMIDQ63HM1 303 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 SLC22A25Q6T423 547 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 C5orf46Q6UWT4 87 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 H1FNTQ75WM6 255 aaPredicted RBP10.53□□□□□ -0.72
USP53-201ENST00000274030 HSD17B11Q8NBQ5 300 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 SCCPDHQ8NBX0 429 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 OR10K1Q8NGX5 313 aa10.53□□□□□ -0.72
USP53-201ENST00000274030 ZNF578Q96N58 590 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms