RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ZNF689Q96CS4 500 aaPredicted RBP11.7□□□□□ -0.54
HERC6-202ENST00000273960 SGPP1Q9BX95 441 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 SOX1O00570 391 aaPredicted RBP11.7□□□□□ -0.54
HERC6-202ENST00000273960 ITGA10O75578 1167 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 RCBTB2O95199 551 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 PRSS3P35030 304 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 MESP2Q0VG99 397 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 PON3Q15166 354 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 MRPL2Q5T653 305 aaKnown RBP11.7□□□□□ -0.54
HERC6-202ENST00000273960 ZNF585AQ6P3V2 769 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 SSX9Q7RTT3 188 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 BHLHE23Q8NDY6 225 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 AKR7LQ8NHP1 331 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 SUCNR1Q9BXA5 334 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 LRRC72A6NJI9 287 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 PRR32B1ATL7 298 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 CTDSPLO15194 276 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 AIFM1O95831 613 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 CA3P07451 260 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 RAB6AP20340 208 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 AGTR1P30556 359 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 COL19A1Q14993 1142 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 OVCH1Q7RTY7 1134 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 SFTPA1Q8IWL2 248 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 DND1Q8IYX4 353 aaKnown RBP11.7□□□□□ -0.54
HERC6-202ENST00000273960 CRIPAKQ8N1N5 446 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 KCNRGQ8N5I3 272 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 MRPL43Q8N983 215 aaKnown RBP11.7□□□□□ -0.54
HERC6-202ENST00000273960 TSEN15Q8WW01 171 aaKnown RBP11.7□□□□□ -0.54
HERC6-202ENST00000273960 PPP1R14AQ96A00 147 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 MOAP1Q96BY2 351 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 IP6K3Q96PC2 410 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 SMIM3Q9BZL3 60 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 RHOFQ9HBH0 211 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 GSKIPQ9P0R6 139 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 MED31Q9Y3C7 131 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 CSAG2Q9Y5P2 127 aa11.7□□□□□ -0.54
HERC6-202ENST00000273960 THSD7BQ9C0I4 1608 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 GGT3PA6NGU5 568 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 COLCA2A8K830 154 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 C4orf51C9J302 202 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 H7C1Q1 480 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 GLSO94925 669 aaPredicted RBP11.69□□□□□ -0.54
HERC6-202ENST00000273960 ABOP16442 354 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 CSNK2A2P19784 350 aaPredicted RBP11.69□□□□□ -0.54
HERC6-202ENST00000273960 PI3P19957 117 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 PBX2P40425 430 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 LSSP48449 732 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 PRLHRP49683 370 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 ENPP7Q6UWV6 458 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 NUDT18Q6ZVK8 323 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 SAMD14Q8IZD0 417 aaPredicted RBP11.69□□□□□ -0.54
HERC6-202ENST00000273960 OR2A12Q8NGT7 310 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 ZCCHC10Q8TBK6 192 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 FGF13Q92913 245 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 TMEM106AQ96A25 262 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 JSRP1Q96MG2 331 aaPredicted RBP11.69□□□□□ -0.54
HERC6-202ENST00000273960 A0A087WV62 115 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 GPR37O15354 613 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 GREM1O60565 184 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 GPX4P36969 197 aaPredicted RBP11.69□□□□□ -0.54
HERC6-202ENST00000273960 POU3F4P49335 361 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 CASP6P55212 293 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 IL10RAQ13651 578 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 GAS6Q14393 721 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 USF2Q15853 346 aaPredicted RBP11.69□□□□□ -0.54
HERC6-202ENST00000273960 NNATQ16517 81 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 OR10H5Q8NGA6 315 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 ST7LQ8TDW4 575 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 SECTM1Q8WVN6 248 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 UNKLQ9H9P5 680 aaKnown RBP11.69□□□□□ -0.54
HERC6-202ENST00000273960 SLC23A2Q9UGH3 650 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 KIAA1671Q9BY89 1806 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 METTL12A8MUP2 240 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 C9JQL5 133 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 SLC22A6Q4U2R8 563 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 Q6ZNB5 142 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 ACOT7LQ6ZUV0 252 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 RD3Q7Z3Z2 195 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 BPIFB2Q8N4F0 458 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 ADAD1Q96M93 576 aaKnown RBP11.69□□□□□ -0.54
HERC6-202ENST00000273960 ARHGDIGQ99819 225 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 ACKR4Q9NPB9 350 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 DEC1Q9P2X7 70 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 TNFSF18Q9UNG2 199 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 PCDHGA1Q9Y5H4 931 aa11.69□□□□□ -0.54
HERC6-202ENST00000273960 BLOC1S5-TXNDC5H3BN57 136 aa11.68□□□□□ -0.54
HERC6-202ENST00000273960 H7C417 338 aa11.68□□□□□ -0.54
HERC6-202ENST00000273960 PRKNO60260 465 aaPredicted RBP11.68□□□□□ -0.54
HERC6-202ENST00000273960 MED6O75586 246 aa11.68□□□□□ -0.54
HERC6-202ENST00000273960 S100A8P05109 93 aa11.68□□□□□ -0.54
HERC6-202ENST00000273960 H2AFB1P0C5Y9 115 aa11.68□□□□□ -0.54
HERC6-202ENST00000273960 GAAP10253 952 aa11.68□□□□□ -0.54
HERC6-202ENST00000273960 SEC13P55735 322 aa11.68□□□□□ -0.54
HERC6-202ENST00000273960 RAB2AP61019 212 aa11.68□□□□□ -0.54
HERC6-202ENST00000273960 MICBQ29980 383 aa11.68□□□□□ -0.54
HERC6-202ENST00000273960 CDNFQ49AH0 187 aa11.68□□□□□ -0.54
HERC6-202ENST00000273960 RANBP3LQ86VV4 465 aaPredicted RBP11.68□□□□□ -0.54
HERC6-202ENST00000273960 MISPQ8IVT2 679 aa11.68□□□□□ -0.54
HERC6-202ENST00000273960 VN1R2Q8NFZ6 395 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms