RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 KLHL9Q9P2J3 617 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 ERVK-18Q9QC07 812 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 MYRFQ9Y2G1 1151 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 ZNF175Q9Y473 711 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 FAM215AQ9Y5M1 114 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 PCNX1Q96RV3 2341 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 IGKV3D-15A0A087WSY6 115 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 TVP23AA6NH52 213 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 AHRRA9YTQ3 701 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 M0R3G1 203 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 PRODHO43272 600 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 UPK3AO75631 287 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 MPZL1O95297 269 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 IGHG1P01857 330 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 YES1P07947 543 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 STSP08842 583 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 MRPL3P09001 348 aaKnown RBP8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 QDPRP09417 244 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 DBTP11182 482 aaKnown RBP8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 EEF1B2P24534 225 aaKnown RBP8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 GSTT1P30711 240 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 HCCSP53701 268 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 SIRPAP78324 504 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 FOXF2Q12947 444 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 RNPS1Q15287 305 aaKnown RBP8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 RBM48Q5RL73 367 aaKnown RBP8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 MEDAGQ5VYS4 303 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 GTF2IRD2BQ6EKJ0 949 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 LRFN4Q6PJG9 635 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 LINGO2Q7L985 606 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 ADCK1Q86TW2 530 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 GTF2IRD2Q86UP8 949 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 DOLPP1Q86YN1 238 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 ZNF511Q8NB15 262 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 NOXO1Q8NFA2 376 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 OR4F15Q8NGB8 312 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 OR6K6Q8NGW6 343 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 KISS1RQ969F8 398 aaPredicted RBP8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 INTS12Q96CB8 462 aaKnown RBP8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 LGALS12Q96DT0 336 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 ZNF837Q96EG3 531 aaPredicted RBP8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 RNFT2Q96EX2 444 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 C12orf49Q9H741 205 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 RNF122Q9H9V4 155 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 PLCXD1Q9NUJ7 323 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 PSORS1C1Q9UIG5 152 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 TINAGQ9UJW2 476 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 B9D1Q9UPM9 204 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 COA3Q9Y2R0 106 aaPredicted RBP8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 NOSIPQ9Y314 301 aaKnown RBP8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 CACNA1CQ13936 2221 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 MYO7BQ6PIF6 2116 aa8.62□□□□□ -1.03
SNRNP40-201ENST00000263694 IGLV1-36A0A0B4J1U3 117 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 SH3D21A4FU49 640 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC19A2O60779 497 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 TOXO94900 526 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 SCG5P05408 212 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 HTR1AP08908 422 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 PSKH1P11801 424 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 C21orf33P30042 268 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 HTR1FP30939 366 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 NAA10P41227 235 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 RPS27P42677 84 aaKnown RBP8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC15A1P46059 708 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 CSNK1A1P48729 337 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC25A1P53007 311 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 MEP1BQ16820 701 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 C1orf185Q5T7R7 199 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 LINC01590Q5TEZ4 76 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 FAM205BPQ63HN1 556 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 NSUN5P2Q63ZY6 315 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 ZNF787Q6DD87 383 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 C20orf196Q8IYI0 205 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 PROKR2Q8NFJ6 384 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 OR51G2Q8NGK0 314 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 OR6N1Q8NGY5 312 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 TMEM54Q969K7 222 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 MCHR2Q969V1 340 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 NMD3Q96D46 503 aaKnown RBP8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 ADAD1Q96M93 576 aaKnown RBP8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 RBP7Q96R05 134 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 ALG12Q9BV10 488 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 BCO1Q9HAY6 547 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 SCN3BQ9NY72 215 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 TAS2R16Q9NYV7 291 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 GLTPQ9NZD2 209 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 NCOA6Q14686 2063 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 ZNF724A8MTY0 619 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 GPR171O14626 319 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 SELENOFO60613 162 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC43A1O75387 559 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 MRPL33O75394 65 aaKnown RBP8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 GLCEO94923 617 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 TNFAIP8O95379 198 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 CCDC159P0C7I6 412 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 EDN3P14138 238 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 AGTR1P30556 359 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 CDAP32320 146 aa8.61□□□□□ -1.03
SNRNP40-201ENST00000263694 MTNR1AP48039 350 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms