RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 FOXF1Q12946 379 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 ESCO2Q56NI9 601 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 EXOSC6Q5RKV6 272 aaKnown RBP12.7□□□□□ -0.38
CDH1-201ENST00000261769 PIWIL3Q7Z3Z3 882 aaKnown RBP12.7□□□□□ -0.38
CDH1-201ENST00000261769 RBM45Q8IUH3 476 aaKnown RBP12.7□□□□□ -0.38
CDH1-201ENST00000261769 EGFL6Q8IUX8 553 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 RAB40AQ8WXH6 277 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 CCDC32Q9BV29 185 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 ZNF286AQ9HBT8 521 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 PRDM6Q9NQX0 595 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 OCIAD1Q9NX40 245 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 GNG12Q9UBI6 72 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 OR52A1Q9UKL2 312 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 SEC16AO15027 2179 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 SHROOM3Q8TF72 1996 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 NAP1L6A6NFF2 107 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 ZNF254O75437 659 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 MEOX1P50221 254 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 TAS2R31P59538 309 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 MEF2DQ14814 521 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 PCGF3Q3KNV8 242 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 B3GNT8Q7Z7M8 397 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 OR6V1Q8N148 313 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 ABHD4Q8TB40 342 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 TMEM106AQ96A25 262 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 KCNG2Q9UJ96 466 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 SMCO3A2RU48 225 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 AGAP14A8MT82 685 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 FCARP24071 287 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 PTH2RP49190 550 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 CMPK2Q5EBM0 449 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 VN1R4Q7Z5H5 301 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 OR2L13Q8N349 312 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 FGF11Q92914 225 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 NICN1Q9BSH3 213 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 RTL8AQ9BWD3 113 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 TRAPPC2LQ9UL33 140 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 PCDHGA1Q9Y5H4 931 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 RGPD3A6NKT7 1758 aaPredicted RBP12.7□□□□□ -0.38
CDH1-201ENST00000261769 H7C1Q1 480 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 ACOT8O14734 319 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 SBK3P0C264 359 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 C21orf33P30042 268 aaPredicted RBP12.7□□□□□ -0.38
CDH1-201ENST00000261769 BMXP51813 675 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 UBE2IP63279 158 aaKnown RBP12.7□□□□□ -0.38
CDH1-201ENST00000261769 DUSP2Q05923 314 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 ISXQ2M1V0 245 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 Q6ZPB1 254 aaPredicted RBP12.7□□□□□ -0.38
CDH1-201ENST00000261769 SLC46A3Q7Z3Q1 461 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 C1orf87Q8N0U7 546 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 MUL1Q969V5 352 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 TMEM59Q9BXS4 323 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 FAM60AQ9NP50 221 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 LUZP4Q9P127 313 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 AHCTF1Q8WYP5 2266 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 SPINT1O43278 529 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 WDR88Q6ZMY6 472 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 COX15Q7KZN9 410 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 ZNF695Q8IW36 515 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 SYNPRQ8TBG9 265 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 M1APQ8TC57 530 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 TXNIPQ9H3M7 391 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 NUP50Q9UKX7 468 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 IGHV5-10-1A0A0J9YXX1 117 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 PRKNO60260 465 aaPredicted RBP12.69□□□□□ -0.38
CDH1-201ENST00000261769 CRHBPP24387 322 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 ALKBH1Q13686 389 aaKnown RBP12.69□□□□□ -0.38
CDH1-201ENST00000261769 ZNF793Q6ZN11 406 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 SERPINA12Q8IW75 414 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 ZNF471Q9BX82 626 aaPredicted RBP12.69□□□□□ -0.38
CDH1-201ENST00000261769 SLC25A37Q9NYZ2 338 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 GMPR2Q9P2T1 348 aaKnown RBP12.69□□□□□ -0.38
CDH1-201ENST00000261769 DIMT1Q9UNQ2 313 aaKnown RBP12.69□□□□□ -0.38
CDH1-201ENST00000261769 ZSCAN5BA6NJL1 495 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 TNFSF11O14788 317 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 GP1BAP07359 652 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 IL3RAP26951 378 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 RAD52P43351 418 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 LSSP48449 732 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 RPL18Q07020 188 aaKnown RBP12.69□□□□□ -0.38
CDH1-201ENST00000261769 RNPS1Q15287 305 aaKnown RBP12.69□□□□□ -0.38
CDH1-201ENST00000261769 WIPI1Q5MNZ9 446 aaPredicted RBP12.69□□□□□ -0.38
CDH1-201ENST00000261769 OR2G6Q5TZ20 316 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 GSG1LQ6UXU4 331 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 SLC22A24Q8N4F4 322 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 NIPSNAP1Q9BPW8 284 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 AIFM2Q9BRQ8 373 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 C1QTNF6Q9BXI9 259 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 MOB1AQ9H8S9 216 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 SCN10AQ9Y5Y9 1956 aa12.69□□□□□ -0.38
CDH1-201ENST00000261769 P2RY10O00398 339 aa12.68□□□□□ -0.38
CDH1-201ENST00000261769 SOCS6O14544 535 aa12.68□□□□□ -0.38
CDH1-201ENST00000261769 CXADRP78310 365 aa12.68□□□□□ -0.38
CDH1-201ENST00000261769 ATXN7L3Q14CW9 347 aaPredicted RBP12.68□□□□□ -0.38
CDH1-201ENST00000261769 EIF2S3LQ2VIR3 472 aaKnown RBP12.68□□□□□ -0.38
CDH1-201ENST00000261769 PLPP5Q8NEB5 264 aa12.68□□□□□ -0.38
CDH1-201ENST00000261769 OR4N2Q8NGD1 307 aa12.68□□□□□ -0.38
CDH1-201ENST00000261769 OR6F1Q8NGZ6 308 aa12.68□□□□□ -0.38
CDH1-201ENST00000261769 PHOX2BQ99453 314 aa12.68□□□□□ -0.38
CDH1-201ENST00000261769 PRRT1Q99946 306 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms