RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 BTLAQ7Z6A9 289 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 JAZF1Q86VZ6 243 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 ARIH2OSQ8N7S6 290 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 ZIC4Q8N9L1 334 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 SLC37A3Q8NCC5 494 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 ZNF519Q8TB69 540 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 ASB10Q8WXI3 467 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 Q96MT0 163 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 HINT3Q9NQE9 182 aaKnown RBP18.32■□□□□ 0.52
RTCA-201ENST00000260563 PARPBPQ9NWS1 579 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 MED29Q9NX70 200 aa18.32■□□□□ 0.52
RTCA-201ENST00000260563 XKRYO14609 159 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 CD8BP10966 210 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 FMO3P31513 532 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 ITGADQ13349 1161 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 OCLNQ16625 522 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 FAM205BPQ63HN1 556 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 NIPAL3Q6P499 406 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 LEG1Q6P5S2 330 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 CXXC5Q7LFL8 322 aaKnown RBP18.31■□□□□ 0.52
RTCA-201ENST00000260563 AAED1Q7RTV5 226 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.31■□□□□ 0.52
RTCA-201ENST00000260563 BCDIN3DQ7Z5W3 292 aaKnown RBP18.31■□□□□ 0.52
RTCA-201ENST00000260563 ZNF100Q8IYN0 542 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 SSC4DQ8WTU2 575 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 HDAC2Q92769 488 aaKnown RBP18.31■□□□□ 0.52
RTCA-201ENST00000260563 APH1AQ96BI3 265 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 TXNDC15Q96J42 360 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 NMNAT3Q96T66 252 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 DNAJC27Q9NZQ0 273 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 RCE1Q9Y256 329 aa18.31■□□□□ 0.52
RTCA-201ENST00000260563 CLEC18AA5D8T8 446 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 A6NIZ1 184 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 FAM183AA6NL82 134 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 PRR23D1E9PI22 279 aaPredicted RBP18.3■□□□□ 0.52
RTCA-201ENST00000260563 ARHGEF9O43307 516 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 ENTPD6O75354 484 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 CLDN14O95500 239 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 PRR23D2P0DMB1 279 aaPredicted RBP18.3■□□□□ 0.52
RTCA-201ENST00000260563 PAICSP22234 425 aaKnown RBP18.3■□□□□ 0.52
RTCA-201ENST00000260563 CDKN2AP42771 156 aaKnown RBP18.3■□□□□ 0.52
RTCA-201ENST00000260563 OR3A2P47893 321 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 CXCR4P61073 352 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 RAP1BP61224 184 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 RAP1AP62834 184 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 SMN1Q16637 294 aaKnown RBP18.3■□□□□ 0.52
RTCA-201ENST00000260563 PLBD1Q6P4A8 553 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 CLEC18BQ6UXF7 455 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 TFAP2EQ6VUC0 442 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 LUZP2Q86TE4 346 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 ADCK1Q86TW2 530 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 CPOQ8IVL8 374 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 CYB561A3Q8NBI2 242 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 CLEC18CQ8NCF0 446 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 NPEPL1Q8NDH3 523 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 LILRB4Q8NHJ6 448 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 OTULINQ96BN8 352 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 OPN3Q9H1Y3 402 aaPredicted RBP18.3■□□□□ 0.52
RTCA-201ENST00000260563 PLSCR4Q9NRQ2 329 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 HCFC1P51610 2035 aa18.3■□□□□ 0.52
RTCA-201ENST00000260563 SH3D21A4FU49 640 aa18.29■□□□□ 0.52
RTCA-201ENST00000260563 MSTNO14793 375 aa18.29■□□□□ 0.52
RTCA-201ENST00000260563 CGAP01215 116 aa18.29■□□□□ 0.52
RTCA-201ENST00000260563 NTF4P34130 210 aa18.29■□□□□ 0.52
RTCA-201ENST00000260563 SELENOPP49908 381 aa18.29■□□□□ 0.52
RTCA-201ENST00000260563 BIDP55957 195 aa18.29■□□□□ 0.52
RTCA-201ENST00000260563 RBM48Q5RL73 367 aaKnown RBP18.29■□□□□ 0.52
RTCA-201ENST00000260563 AADACL4Q5VUY2 407 aa18.29■□□□□ 0.52
RTCA-201ENST00000260563 NXNL2Q5VZ03 156 aa18.29■□□□□ 0.52
RTCA-201ENST00000260563 HDDC2Q7Z4H3 204 aa18.29■□□□□ 0.52
RTCA-201ENST00000260563 BPIFB6Q8NFQ5 453 aa18.29■□□□□ 0.52
RTCA-201ENST00000260563 ADAD1Q96M93 576 aaKnown RBP18.29■□□□□ 0.52
RTCA-201ENST00000260563 ZNF582Q96NG8 517 aaPredicted RBP18.29■□□□□ 0.52
RTCA-201ENST00000260563 DDOQ99489 341 aa18.29■□□□□ 0.52
RTCA-201ENST00000260563 MYRFQ9Y2G1 1151 aa18.29■□□□□ 0.52
RTCA-201ENST00000260563 OR6C68A6NDL8 312 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 WIPF3A6NGB9 483 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 H7C1C5 153 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 SLC1A7O00341 560 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 RPSAP08865 295 aaKnown RBP18.28■□□□□ 0.52
RTCA-201ENST00000260563 RNF224P0DH78 156 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 ASCL1P50553 236 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 LCN6P62502 163 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 CDSNQ15517 529 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 BBS1Q8NFJ9 593 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 PTP4A1Q93096 173 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 ZNF566Q969W8 418 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 SNX18Q96RF0 628 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 EMC6Q9BV81 110 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 YTHDF1Q9BYJ9 559 aaKnown RBP18.28■□□□□ 0.52
RTCA-201ENST00000260563 SLCO5A1Q9H2Y9 848 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 MED20Q9H944 212 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 JKAMPQ9P055 326 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 H2AFY2Q9P0M6 372 aaPredicted RBP18.28■□□□□ 0.52
RTCA-201ENST00000260563 SLC35F4A4IF30 521 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 NKX2-6A6NCS4 301 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 SNTNA6NMZ2 147 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 ZNF726A6NNF4 738 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 M0R3G1 203 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 PRODHO43272 600 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms