RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 OR9K2Q8NGE7 335 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 SIGLEC11Q96RL6 698 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 SEC14L4Q9UDX3 406 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 KCNN3Q9UGI6 736 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 EFCAB9A8MZ26 197 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 M0R082 166 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 MRPL33O75394 65 aaKnown RBP14.84□□□□□ -0.03
SDCBP-201ENST00000260130 EPHA2P29317 976 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 RBM34P42696 430 aaKnown RBP14.84□□□□□ -0.03
SDCBP-201ENST00000260130 PLEKHG7Q6ZR37 379 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 H1FNTQ75WM6 255 aaPredicted RBP14.84□□□□□ -0.03
SDCBP-201ENST00000260130 ZNF100Q8IYN0 542 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 KDM8Q8N371 416 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 ZNF417Q8TAU3 575 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 C7orf34Q96L11 122 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 MOGAT1Q96PD6 335 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 ZNF587Q96SQ5 575 aaPredicted RBP14.84□□□□□ -0.03
SDCBP-201ENST00000260130 RHNO1Q9BSD3 238 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 SLIRPQ9GZT3 109 aaKnown RBP14.84□□□□□ -0.03
SDCBP-201ENST00000260130 PARPBPQ9NWS1 579 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 LRRN3E7EW58 273 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 C16orf97H3BN30 126 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 J3KTA2 159 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 MT-ATP6P00846 226 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 EDNRAP25101 427 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 CD40LGP29965 261 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 UGT2B10P36537 528 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 TGFBR2P37173 567 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 PPP5CP53041 499 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 FOXD4Q12950 439 aaPredicted RBP14.83□□□□□ -0.04
SDCBP-201ENST00000260130 ENTHD1Q8IYW4 607 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 ZNF295-AS1Q8N0V1 137 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 SCAIQ8N9R8 606 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 LINC01560Q8TB33 94 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 TMEM255BQ8WV15 326 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 MYDGFQ969H8 173 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 HS6ST2Q96MM7 605 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 DACH2Q96NX9 599 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 FNDC11Q9BVV2 318 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 ASPNQ9BXN1 380 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 INIPQ9NRY2 104 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 PLCXD1Q9NUJ7 323 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 CRIM1Q9NZV1 1036 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 PRSS50Q9UI38 385 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 ENPP4Q9Y6X5 453 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 FFAR1O14842 300 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 EIF2B2P49770 351 aaKnown RBP14.83□□□□□ -0.04
SDCBP-201ENST00000260130 IFITM3Q01628 133 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 POU4F3Q15319 338 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 IQCCQ4KMZ1 466 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 CREB3L2Q70SY1 520 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.83□□□□□ -0.04
SDCBP-201ENST00000260130 GABRG1Q8N1C3 465 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 ZIC4Q8N9L1 334 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 ADPRHL1Q8NDY3 354 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 RHOXF1Q8NHV9 184 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 MCFD2Q8NI22 146 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 TMEM239Q8WW34 195 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 APH1BQ8WW43 257 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 APH1AQ96BI3 265 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 COPS4Q9BT78 406 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 MMP27Q9H306 513 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 MEPEQ9NQ76 525 aaPredicted RBP14.83□□□□□ -0.04
SDCBP-201ENST00000260130 NDRG3Q9UGV2 375 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 ITGB1BP2Q9UKP3 347 aa14.83□□□□□ -0.04
SDCBP-201ENST00000260130 CNOT4O95628 575 aaKnown RBP14.82□□□□□ -0.04
SDCBP-201ENST00000260130 CH25HO95992 272 aa14.82□□□□□ -0.04
SDCBP-201ENST00000260130 LCKP06239 509 aa14.82□□□□□ -0.04
SDCBP-201ENST00000260130 RRM2P31350 389 aa14.82□□□□□ -0.04
SDCBP-201ENST00000260130 TBCEQ15813 527 aaPredicted RBP14.82□□□□□ -0.04
SDCBP-201ENST00000260130 ZNF74Q16587 644 aa14.82□□□□□ -0.04
SDCBP-201ENST00000260130 STAC2Q6ZMT1 411 aa14.82□□□□□ -0.04
SDCBP-201ENST00000260130 Q6ZT83 130 aa14.82□□□□□ -0.04
SDCBP-201ENST00000260130 TSEN54Q7Z6J9 526 aaKnown RBP14.82□□□□□ -0.04
SDCBP-201ENST00000260130 FAM222BQ8WU58 562 aa14.82□□□□□ -0.04
SDCBP-201ENST00000260130 TMEM45BQ96B21 275 aa14.82□□□□□ -0.04
SDCBP-201ENST00000260130 OXGR1Q96P68 337 aa14.82□□□□□ -0.04
SDCBP-201ENST00000260130 ZNF385AQ96PM9 386 aaKnown RBP14.82□□□□□ -0.04
SDCBP-201ENST00000260130 DCSTAMPQ9H295 470 aa14.82□□□□□ -0.04
SDCBP-201ENST00000260130 MRPL39Q9NYK5 338 aaKnown RBP14.82□□□□□ -0.04
SDCBP-201ENST00000260130 RHCGQ9UBD6 479 aa14.82□□□□□ -0.04
SDCBP-201ENST00000260130 PKDREJQ9NTG1 2253 aa14.82□□□□□ -0.04
SDCBP-201ENST00000260130 DCHS2Q6V1P9 2916 aa14.82□□□□□ -0.04
SDCBP-201ENST00000260130 LOC102725191A0A1B0GVB3 256 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 ISPDA4D126 451 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 ZNF43P17038 809 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 GGT2P36268 569 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 UGT2B15P54855 530 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 CASP12Q6UXS9 341 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 C14orf79Q96F83 325 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 FKRPQ9H9S5 495 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 NANSQ9NR45 359 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 NDUFAF4Q9P032 175 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 B3GAT1Q9P2W7 334 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 MED31Q9Y3C7 131 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 FAM32AQ9Y421 112 aaKnown RBP14.81□□□□□ -0.04
SDCBP-201ENST00000260130 MPDZO75970 2070 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 MS4A18H0YCH9 400 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 AIREO43918 545 aa14.81□□□□□ -0.04
SDCBP-201ENST00000260130 ADAP00813 363 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms