RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 SRA1Q9HD15 236 aaKnown RBP15.78■□□□□ 0.12
CCDC115-201ENST00000259229 LSM2Q9Y333 95 aaKnown RBP15.78■□□□□ 0.12
CCDC115-201ENST00000259229 IRGMA1A4Y4 181 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 NPIPA2E9PIF3 369 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 NPIPA3F8WFD2 350 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 AHCYL1O43865 530 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 AQP8O94778 261 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 GPANK1O95872 356 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 LCKP06239 509 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 LIMS3P0CW19 117 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 LIMS4P0CW20 117 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 DCKP27707 260 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 GP2P55259 537 aaKnown RBP15.77■□□□□ 0.12
CCDC115-201ENST00000259229 LGALS3BPQ08380 585 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 CAMK2DQ13557 499 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 ZNF324BQ6AW86 544 aaPredicted RBP15.77■□□□□ 0.12
CCDC115-201ENST00000259229 FGD2Q7Z6J4 655 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 ADGRE4PQ86SQ3 457 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 SVOPQ8N4V2 548 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 PROKR2Q8NFJ6 384 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 OR6K6Q8NGW6 343 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 FNDC9Q8TBE3 224 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 SMAP2Q8WU79 429 aaPredicted RBP15.77■□□□□ 0.12
CCDC115-201ENST00000259229 ADAD1Q96M93 576 aaKnown RBP15.77■□□□□ 0.12
CCDC115-201ENST00000259229 OR2M2Q96R28 347 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 RACGAP1Q9H0H5 632 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 PRORYQ9H606 182 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 PAQR5Q9NXK6 330 aaPredicted RBP15.77■□□□□ 0.12
CCDC115-201ENST00000259229 MOKQ9UQ07 419 aa15.77■□□□□ 0.12
CCDC115-201ENST00000259229 IGKV3D-15A0A087WSY6 115 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 SELENOFO60613 162 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 SLC16A7O60669 478 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 INMTO95050 263 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 IGHG1P01857 330 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 PSKH1P11801 424 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 LCN1P1Q5VSP4 162 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 UBE2UQ5VVX9 321 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 TIGD4Q8IY51 512 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 ZNF511Q8NB15 262 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 MARCH7Q9H992 704 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 BATF3Q9NR55 127 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 CAMK2AQ9UQM7 478 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 PTGS2P35354 604 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 CD79BP40259 229 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 SELENOPP49908 381 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 RASGEF1BQ0VAM2 473 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 POU4F2Q12837 409 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 RAB39AQ14964 217 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 PHYHD1Q5SRE7 291 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 HDDC2Q7Z4H3 204 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 RFLNBQ8N5W9 214 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 NANOGP1Q8N7R0 232 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 POMGNT2Q8NAT1 580 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 ZNF485Q8NCK3 441 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 OR5M11Q96RB7 305 aa15.76■□□□□ 0.11
CCDC115-201ENST00000259229 CNN2Q99439 309 aaKnown RBP15.76■□□□□ 0.11
CCDC115-201ENST00000259229 FOXD3Q9UJU5 478 aaPredicted RBP15.76■□□□□ 0.11
CCDC115-201ENST00000259229 A0A1B0GTH9 108 aa15.75■□□□□ 0.11
CCDC115-201ENST00000259229 C12orf71A8MTZ7 269 aa15.75■□□□□ 0.11
CCDC115-201ENST00000259229 CENPBD1B2RD01 187 aa15.75■□□□□ 0.11
CCDC115-201ENST00000259229 GAAP10253 952 aa15.75■□□□□ 0.11
CCDC115-201ENST00000259229 NAA10P41227 235 aaPredicted RBP15.75■□□□□ 0.11
CCDC115-201ENST00000259229 SYT6Q5T7P8 510 aaPredicted RBP15.75■□□□□ 0.11
CCDC115-201ENST00000259229 FOXB2Q5VYV0 432 aa15.75■□□□□ 0.11
CCDC115-201ENST00000259229 CARD17Q5XLA6 110 aa15.75■□□□□ 0.11
CCDC115-201ENST00000259229 OR13F1Q8NGS4 319 aa15.75■□□□□ 0.11
CCDC115-201ENST00000259229 TMEM54Q969K7 222 aa15.75■□□□□ 0.11
CCDC115-201ENST00000259229 GPR137Q96N19 417 aa15.75■□□□□ 0.11
CCDC115-201ENST00000259229 FOXN4Q96NZ1 517 aa15.75■□□□□ 0.11
CCDC115-201ENST00000259229 RBM38Q9H0Z9 239 aaKnown RBP15.75■□□□□ 0.11
CCDC115-201ENST00000259229 MRPL22Q9NWU5 206 aaKnown RBP15.75■□□□□ 0.11
CCDC115-201ENST00000259229 ERVK13-1Q9NX77 482 aa15.75■□□□□ 0.11
CCDC115-201ENST00000259229 CLCF1Q9UBD9 225 aa15.75■□□□□ 0.11
CCDC115-201ENST00000259229 MCTS1Q9ULC4 181 aaKnown RBP15.75■□□□□ 0.11
CCDC115-201ENST00000259229 RCE1Q9Y256 329 aa15.75■□□□□ 0.11
CCDC115-201ENST00000259229 EXOSC1Q9Y3B2 195 aaKnown RBP15.75■□□□□ 0.11
CCDC115-201ENST00000259229 TMEM129A0AVI4 362 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 TVP23AA6NH52 213 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 ZNF99A8MXY4 864 aaPredicted RBP15.74■□□□□ 0.11
CCDC115-201ENST00000259229 ACACBO00763 2458 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 SEC14L2O76054 403 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 SYNGR4O95473 234 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 TGM6O95932 706 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 CRYABP02511 175 aaKnown RBP15.74■□□□□ 0.11
CCDC115-201ENST00000259229 CRABP1P29762 137 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 ZNF133P52736 654 aaPredicted RBP15.74■□□□□ 0.11
CCDC115-201ENST00000259229 CLRN1P58418 232 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 ZNF85Q03923 595 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 LRFN4Q6PJG9 635 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 SLC25A47Q6Q0C1 308 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 SSX6Q7RTT6 188 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 ACBD7Q8N6N7 88 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 TMEM45BQ96B21 275 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 ZNF775Q96BV0 537 aaPredicted RBP15.74■□□□□ 0.11
CCDC115-201ENST00000259229 RERGLQ9H628 205 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 VCX3AQ9NNX9 186 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 COPS3Q9UNS2 423 aa15.74■□□□□ 0.11
CCDC115-201ENST00000259229 COA3Q9Y2R0 106 aaPredicted RBP15.74■□□□□ 0.11
CCDC115-201ENST00000259229 ZNF726A6NNF4 738 aa15.73■□□□□ 0.11
CCDC115-201ENST00000259229 ATP6V1E1P36543 226 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms