RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 NRN1LQ496H8 165 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 ACSF3Q4G176 576 aaPredicted RBP11.49□□□□□ -0.57
LSM8-201ENST00000249299 C20orf196Q8IYI0 205 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 TMEM123Q8N131 208 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 OR6V1Q8N148 313 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 CYB561A3Q8NBI2 242 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 TSPAN14Q8NG11 270 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 FAM57AQ8TBR7 257 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 GGHQ92820 318 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 TMEM54Q969K7 222 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 COPS4Q9BT78 406 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 CDCA4Q9BXL8 241 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 LINC00470Q9BZP3 86 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 SYT4Q9H2B2 425 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 MARCH7Q9H992 704 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 RPRD1BQ9NQG5 326 aaKnown RBP11.49□□□□□ -0.57
LSM8-201ENST00000249299 ASB6Q9NWX5 421 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 SCOCQ9UIL1 159 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 FOXD3Q9UJU5 478 aaPredicted RBP11.49□□□□□ -0.57
LSM8-201ENST00000249299 B9D1Q9UPM9 204 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 NCKAP5O14513 1909 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 PIEZO2Q9H5I5 2752 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 IGLV1-36A0A0B4J1U3 117 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 IGHV3-15A0A0B4J1V0 119 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 MBD3L4A6NDZ8 208 aaPredicted RBP11.48□□□□□ -0.57
LSM8-201ENST00000249299 MBD3L3A6NE82 208 aaPredicted RBP11.48□□□□□ -0.57
LSM8-201ENST00000249299 CCDC182A6NF36 153 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 MBD3L5A6NJ08 208 aaPredicted RBP11.48□□□□□ -0.57
LSM8-201ENST00000249299 PTGES3LE9PB15 166 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 PRRG2O14669 202 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 RGS10O43665 173 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 SS18L1O75177 396 aaPredicted RBP11.48□□□□□ -0.57
LSM8-201ENST00000249299 MRPL33O75394 65 aaKnown RBP11.48□□□□□ -0.57
LSM8-201ENST00000249299 KHDRBS3O75525 346 aaKnown RBP11.48□□□□□ -0.57
LSM8-201ENST00000249299 AQP8O94778 261 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 CDK1P06493 297 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 KLK2P20151 261 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 EEF1B2P24534 225 aaKnown RBP11.48□□□□□ -0.57
LSM8-201ENST00000249299 TIMP3P35625 211 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 CAPZA2P47755 286 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 CSNK1A1P48729 337 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 MVKQ03426 396 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 RUNX1T1Q06455 604 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 ST3GAL4Q11206 333 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 MELKQ14680 651 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 KLHL12Q53G59 568 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 C10orf128Q5T292 105 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 LINC01590Q5TEZ4 76 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 AAED1Q7RTV5 226 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 P4HA3Q7Z4N8 544 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 FGD2Q7Z6J4 655 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 STX19Q8N4C7 294 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 SVOPQ8N4V2 548 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 MBD3L2Q8NHZ7 208 aaPredicted RBP11.48□□□□□ -0.57
LSM8-201ENST00000249299 ABHD3Q8WU67 409 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 KISS1RQ969F8 398 aaPredicted RBP11.48□□□□□ -0.57
LSM8-201ENST00000249299 RELTQ969Z4 430 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 RNFT2Q96EX2 444 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 TMEM80Q96HE8 168 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 ZNF385AQ96PM9 386 aaKnown RBP11.48□□□□□ -0.57
LSM8-201ENST00000249299 WACQ9BTA9 647 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 HCAR1Q9BXC0 346 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 MRPS26Q9BYN8 205 aaKnown RBP11.48□□□□□ -0.57
LSM8-201ENST00000249299 NUAK2Q9H093 628 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 OR51V1Q9H2C8 321 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 VCX3AQ9NNX9 186 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 B3GAT2Q9NPZ5 323 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 GLTPQ9NZD2 209 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 KCNG2Q9UJ96 466 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 DIMT1Q9UNQ2 313 aaKnown RBP11.48□□□□□ -0.57
LSM8-201ENST00000249299 NOSIPQ9Y314 301 aaKnown RBP11.48□□□□□ -0.57
LSM8-201ENST00000249299 EXOSC1Q9Y3B2 195 aaKnown RBP11.48□□□□□ -0.57
LSM8-201ENST00000249299 SPTA1P02549 2419 aa11.48□□□□□ -0.57
LSM8-201ENST00000249299 RPL36A-HNRNPH2H7BZ11 118 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 J3QRE1 110 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 SLC16A7O60669 478 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 IGHA1P01876 353 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 SBK2P0C263 348 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 GSTT1P30711 240 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 ATP6V1E1P36543 226 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 NUDT6P53370 316 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 ACTC1P68032 377 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 ACTA1P68133 377 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 HSF2Q03933 536 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 GUSBP1Q15486 140 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 LINC01559Q495D7 138 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 TEX30Q5JUR7 227 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 SLC25A47Q6Q0C1 308 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 B3GNT6Q6ZMB0 384 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 BCDIN3DQ7Z5W3 292 aaKnown RBP11.47□□□□□ -0.57
LSM8-201ENST00000249299 PROKR2Q8NFJ6 384 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 BBS1Q8NFJ9 593 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 OR6N1Q8NGY5 312 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 FCGR1BQ92637 280 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 OTULINQ96BN8 352 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 LGALS12Q96DT0 336 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 MRPL48Q96GC5 212 aaKnown RBP11.47□□□□□ -0.57
LSM8-201ENST00000249299 EMC6Q9BV81 110 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 YIPF3Q9GZM5 350 aa11.47□□□□□ -0.57
LSM8-201ENST00000249299 TP63Q9H3D4 680 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms