RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TSC22D1Q15714 1073 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 C9orf135Q5VTT2 229 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 GPR139Q6DWJ6 353 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 ALKBH2Q6NS38 261 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 C1orf94Q6P1W5 598 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 SMARCD3Q6STE5 483 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 TMEM108Q6UXF1 575 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 NHLRC1Q6VVB1 395 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 DEPDC4Q8N2C3 294 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 OR1K1Q8NGR3 316 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 OR13C2Q8NGS9 318 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 MOSPD2Q8NHP6 518 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 ASB10Q8WXI3 467 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 NANOS1Q8WY41 292 aaKnown RBP9.9□□□□□ -0.82
SF3B6-201ENST00000233468 TMEM54Q969K7 222 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 PIK3IP1Q96FE7 263 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 RADILQ96JH8 1075 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 FUZQ9BT04 418 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 ALG12Q9BV10 488 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 SLC17A5Q9NRA2 495 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 MGAT4BQ9UQ53 548 aa9.9□□□□□ -0.82
SF3B6-201ENST00000233468 CDC42EP2O14613 210 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 PTP4A3O75365 173 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 FARS2O95363 451 aaKnown RBP9.89□□□□□ -0.83
SF3B6-201ENST00000233468 HRGP04196 525 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 THBDP07204 575 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 CD3EP07766 207 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 PGA4P0DJD7 388 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 PGA3P0DJD8 388 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 FCGR1AP12314 374 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 CD99P14209 185 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 HOXB4P17483 251 aaPredicted RBP9.89□□□□□ -0.83
SF3B6-201ENST00000233468 SLC6A6P31641 620 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 ACVR1BP36896 505 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 LIMS1P48059 325 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 ARF1P84077 181 aaKnown RBP9.89□□□□□ -0.83
SF3B6-201ENST00000233468 TSPAN31Q12999 210 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 TOP3AQ13472 1001 aaPredicted RBP9.89□□□□□ -0.83
SF3B6-201ENST00000233468 MELKQ14680 651 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 MICAQ29983 383 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 CEACAM16Q2WEN9 425 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 THEM4Q5T1C6 240 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 DPY19L2P2Q6ZN68 376 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 ASRGL1Q7L266 308 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 DPPA2Q7Z7J5 298 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 ZER1Q7Z7L7 766 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 LSRQ86X29 649 aaPredicted RBP9.89□□□□□ -0.83
SF3B6-201ENST00000233468 OR52L1Q8NGH7 329 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 OR52N5Q8NH56 324 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 FANK1Q8TC84 345 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 RAB3IPQ96QF0 476 aaPredicted RBP9.89□□□□□ -0.83
SF3B6-201ENST00000233468 GPX7Q96SL4 187 aaPredicted RBP9.89□□□□□ -0.83
SF3B6-201ENST00000233468 SMURF2Q9HAU4 748 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 DNAJB9Q9UBS3 223 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 FBXL3Q9UKT7 428 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 SIGLEC7Q9Y286 467 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 SLC25A15Q9Y619 301 aa9.89□□□□□ -0.83
SF3B6-201ENST00000233468 ARPC4-TTLL3A0A0A6YYG9 625 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.88□□□□□ -0.83
SF3B6-201ENST00000233468 ARRDC5A6NEK1 342 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 DEFB108AA8MXU0 73 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 DHHO43323 396 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 LILRA1O75019 489 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 FKBP6O75344 327 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 DEAF1O75398 565 aaPredicted RBP9.88□□□□□ -0.83
SF3B6-201ENST00000233468 TRMUO75648 421 aaKnown RBP9.88□□□□□ -0.83
SF3B6-201ENST00000233468 QDPRP09417 244 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 APEHP13798 732 aaKnown RBP9.88□□□□□ -0.83
SF3B6-201ENST00000233468 FUT4P22083 530 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 PTAFRP25105 342 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 CD47Q08722 323 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 COX10Q12887 443 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 RFX4Q33E94 735 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 KRTAP21-3Q3LHN1 58 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 TBRG1Q3YBR2 411 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 NRN1LQ496H8 165 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 ARMC4Q5T2S8 1044 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 PGBD2Q6P3X8 592 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 ZNF813Q6ZN06 617 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 ZNF627Q7L945 461 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 YTHDF3Q7Z739 585 aaKnown RBP9.88□□□□□ -0.83
SF3B6-201ENST00000233468 ADCK1Q86TW2 530 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 CDC20BQ86Y33 519 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 ARIH2OSQ8N7S6 290 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 FAM169BQ8N8A8 192 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 PAPD5Q8NDF8 572 aaKnown RBP9.88□□□□□ -0.83
SF3B6-201ENST00000233468 NOXO1Q8NFA2 376 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 BCL2L2Q92843 193 aaPredicted RBP9.88□□□□□ -0.83
SF3B6-201ENST00000233468 PLPPR2Q96GM1 343 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 ZNF570Q96NI8 536 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 FOXB1Q99853 325 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 KCNS3Q9BQ31 491 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 KATNB1Q9BVA0 655 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 MRPL13Q9BYD1 178 aaKnown RBP9.88□□□□□ -0.83
SF3B6-201ENST00000233468 KCNN2Q9H2S1 579 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 GSX1Q9H4S2 264 aaPredicted RBP9.88□□□□□ -0.83
SF3B6-201ENST00000233468 DENND2DQ9H6A0 471 aaPredicted RBP9.88□□□□□ -0.83
SF3B6-201ENST00000233468 ZNF556Q9HAH1 456 aa9.88□□□□□ -0.83
SF3B6-201ENST00000233468 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.88□□□□□ -0.83
SF3B6-201ENST00000233468 ZNF346Q9UL40 294 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms