RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 FOXJ3Q9UPW0 622 aa20.09■□□□□ 0.81
CCDC9-201ENST00000221922 A0A1B0GUH1 482 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 G3V3Q6 166 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 RENP00797 406 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 F13BP05160 661 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 SDHBP21912 280 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 ITPKBP27987 946 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 MAGEB1P43366 347 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 AP2S1P53680 142 aaPredicted RBP20.08■□□□□ 0.81
CCDC9-201ENST00000221922 PNLIPRP2P54317 469 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 MRPS10P82664 201 aaKnown RBP20.08■□□□□ 0.81
CCDC9-201ENST00000221922 SQSTM1Q13501 440 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 FCAMRQ8WWV6 532 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 TAAR8Q969N4 342 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 OMA1Q96E52 524 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 S100A16Q96FQ6 103 aaKnown RBP20.08■□□□□ 0.81
CCDC9-201ENST00000221922 MNTQ99583 582 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 NRSN2Q9GZP1 204 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 NKIRAS2Q9NYR9 191 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 EIF3KQ9UBQ5 218 aaKnown RBP20.08■□□□□ 0.81
CCDC9-201ENST00000221922 OR5V1Q9UGF6 321 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 FLVCR2Q9UPI3 526 aa20.08■□□□□ 0.81
CCDC9-201ENST00000221922 CACNA1EQ15878 2313 aa20.08■□□□□ 0.8
CCDC9-201ENST00000221922 FER1L5A0AVI2 2057 aa20.08■□□□□ 0.8
CCDC9-201ENST00000221922 TRAV36DV7A0A075B6V5 113 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 PSMD9O00233 223 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 MNDAP41218 407 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 DHPSP49366 369 aaPredicted RBP20.07■□□□□ 0.8
CCDC9-201ENST00000221922 OLFML2AQ68BL7 652 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 SIGIRRQ6IA17 410 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 OR8H3Q8N146 312 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 ZNF511Q8NB15 262 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 GCDHQ92947 438 aaPredicted RBP20.07■□□□□ 0.8
CCDC9-201ENST00000221922 TSPAN32Q96QS1 320 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 BEX1Q9HBH7 125 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 NPDC1Q9NQX5 325 aaPredicted RBP20.07■□□□□ 0.8
CCDC9-201ENST00000221922 FBXL3Q9UKT7 428 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 MKL2Q9ULH7 1088 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 TMA7Q9Y2S6 64 aaKnown RBP20.07■□□□□ 0.8
CCDC9-201ENST00000221922 TNRC6BQ9UPQ9 1833 aaKnown RBP20.07■□□□□ 0.8
CCDC9-201ENST00000221922 ANKRD20A5PA0PJZ0 165 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 CDC14CA4D256 554 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 C19orf67A6NJJ6 358 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 FAM171A2A8MVW0 826 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 SHOXO15266 292 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 UPK3AO75631 287 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 GP1BBP13224 206 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 GRPRP30550 384 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 SELENOPP49908 381 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 METTL11BQ5VVY1 283 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 TSSK4Q6SA08 328 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 STAC2Q6ZMT1 411 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 NLRC3Q7RTR2 1065 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 MARCH3Q86UD3 253 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 PLPP5Q8NEB5 264 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 ZNF524Q96C55 264 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 GUCD1Q96NT3 240 aa20.07■□□□□ 0.8
CCDC9-201ENST00000221922 SLC25A12O75746 678 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 ZNF81P51508 661 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 CBFBQ13951 182 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 Q499Y3 187 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 MESTQ5EB52 335 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 STPG1Q5TH74 334 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 RHBDD2Q6NTF9 364 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 RFPL4BQ6ZWI9 263 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 SERPINA12Q8IW75 414 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 SYNPRQ8TBG9 265 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 NSMAFQ92636 917 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 HAVCR1Q96D42 359 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 ADAD1Q96M93 576 aaKnown RBP20.06■□□□□ 0.8
CCDC9-201ENST00000221922 TSSK2Q96PF2 358 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 RTN4RQ9BZR6 473 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 TGIF2Q9GZN2 237 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 TSPAN10Q9H1Z9 355 aaPredicted RBP20.06■□□□□ 0.8
CCDC9-201ENST00000221922 KLK11Q9UBX7 282 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 MRM2Q9UI43 246 aaKnown RBP20.06■□□□□ 0.8
CCDC9-201ENST00000221922 KLHDC2Q9Y2U9 406 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 TRBV5-5A0A0J9YX44 114 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 C4orf47A7E2U8 309 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 ICMTO60725 284 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 MPC2O95563 127 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 NUDT14O95848 222 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 ABHD16AO95870 558 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 MT-ATP6P00846 226 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 BGLAPP02818 100 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 ABCD3P28288 659 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 VEGFCP49767 419 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 CLDN12P56749 244 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 SNTA1Q13424 505 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 ALKBH1Q13686 389 aaKnown RBP20.06■□□□□ 0.8
CCDC9-201ENST00000221922 NR0B2Q15466 257 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 Q6ZTK2 550 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 PRSS58Q8IYP2 241 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 OR6V1Q8N148 313 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 ZNF441Q8N8Z8 693 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 OR2T35Q8NGX2 323 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 MIB2Q96AX9 1013 aa20.06■□□□□ 0.8
CCDC9-201ENST00000221922 UTP23Q9BRU9 249 aaKnown RBP20.06■□□□□ 0.8
CCDC9-201ENST00000221922 METTL17Q9H7H0 456 aaPredicted RBP20.06■□□□□ 0.8
CCDC9-201ENST00000221922 ETV7Q9Y603 341 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms