RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 SPANXN2Q5MJ10 180 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 HLA-DQA1Q5Y7H0 255 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 IDO2Q6ZQW0 420 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 SLC29A4Q7RTT9 530 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 C9orf40Q8IXQ3 194 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 MAML2Q8IZL2 1156 aaPredicted RBP9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 FAM185AQ8N0U4 392 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 LINC00518Q8N0U6 118 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 PARP16Q8N5Y8 322 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 ARIH2OSQ8N7S6 290 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 TMEM99Q8N816 258 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 ELOA3Q8NG57 546 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 OR4D9Q8NGE8 314 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 OR5M3Q8NGP4 307 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 PHOSPHO1Q8TCT1 267 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 DUSP19Q8WTR2 217 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 THRSPQ92748 146 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 WNT2BQ93097 391 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 OTULINQ96BN8 352 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 RRNAD1Q96FB5 475 aaKnown RBP9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 ALG8Q9BVK2 526 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 CPAMD8Q8IZJ3 1885 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 XKRY2A2RUG3 117 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 FAM90A18PA6NE21 464 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 FAM90A16PA6NEW6 464 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 FAM90A9PA6NNJ1 464 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 FAM171A2A8MVW0 826 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 FAM90A5PA8MXJ8 464 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 CYTIPO60759 359 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 CDRT1O95170 752 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 ABHD16AO95870 558 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 HLA-DPB1P04440 258 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 SBK2P0C263 348 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 FAM90A15PP0C7V4 464 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 FAM90A14PP0C7W9 464 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 SPNP16150 400 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 PTBP1P26599 531 aaKnown RBP eCLIP9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 IL12BP29460 328 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 PNLIPRP2P54317 469 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 TAS2R43P59537 309 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 PRPS1P60891 318 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 GALK2Q01415 458 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 FABP5Q01469 135 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 IL24Q13007 206 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 SNTB1Q13884 538 aaKnown RBP9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 TRAM1Q15629 374 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 VWA2Q5GFL6 755 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 LCN1P1Q5VSP4 162 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 PRAMEF17Q5VTA0 474 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 STEAP3Q658P3 488 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 C22orf42Q6IC83 251 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 GPALPP1Q8IXQ4 340 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 ATP6V1C2Q8NEY4 427 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 MRGPRX4Q96LA9 322 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 ERMAPQ96PL5 475 aaPredicted RBP9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 TMEM246Q9BRR3 403 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 CCDC32Q9BV29 185 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 ADGRL4Q9HBW9 690 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 SERINC1Q9NRX5 453 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 BABAM2Q9NXR7 383 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 STMN3Q9NZ72 180 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 TRIOO75962 3097 aa9.6□□□□□ -0.87
APOBEC3D-201ENST00000216099 DAPL1A0PJW8 107 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 SLC35D3Q5M8T2 416 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 ATAD3CQ5T2N8 411 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 C1orf189Q5VU69 101 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 AGAP6Q5VW22 663 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 GUSBP11Q6P575 273 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 TSSK4Q6SA08 328 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 APOOLQ6UXV4 268 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 POMGNT2Q8NAT1 580 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 OR6F1Q8NGZ6 308 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 GRPEL2Q8TAA5 225 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 NAT6Q93015 286 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 AGAP4Q96P64 663 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 TIMP4Q99727 224 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 KCNS3Q9BQ31 491 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 SLC30A2Q9BRI3 323 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 EXTL2Q9UBQ6 330 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 DNAJB11Q9UBS4 358 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 YARS2Q9Y2Z4 477 aaKnown RBP9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 CENPXA8MT69 81 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 IMPA2O14732 288 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 GMFGO60234 142 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 ICOSLGO75144 302 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 REM1O75628 298 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 PLGP00747 810 aaPredicted RBP9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 HTR2BP41595 481 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 GATA4P43694 442 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 LGALS3BPQ08380 585 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 KRR1Q13601 381 aaKnown RBP9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 IL11RAQ14626 422 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 ZNF74Q16587 644 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 ZFP69Q49AA0 526 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 KLHL12Q53G59 568 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 EEF1A1P5Q5VTE0 462 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 VASNQ6EMK4 673 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 ZNF544Q6NX49 715 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 STX12Q86Y82 276 aa9.59□□□□□ -0.87
APOBEC3D-201ENST00000216099 ZNF680Q8NEM1 530 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms