RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 RORCP51449 518 aa17.63■□□□□ 0.41
TNFRSF1A-201ENST00000162749 B3GALT5-AS1P59052 145 aa17.63■□□□□ 0.41
TNFRSF1A-201ENST00000162749 HSF1Q00613 529 aa17.63■□□□□ 0.41
TNFRSF1A-201ENST00000162749 CDC20Q12834 499 aa17.63■□□□□ 0.41
TNFRSF1A-201ENST00000162749 EEF1A1P5Q5VTE0 462 aa17.63■□□□□ 0.41
TNFRSF1A-201ENST00000162749 TMPPEQ6ZT21 453 aa17.63■□□□□ 0.41
TNFRSF1A-201ENST00000162749 ZNF511Q8NB15 262 aa17.63■□□□□ 0.41
TNFRSF1A-201ENST00000162749 ADPRHL1Q8NDY3 354 aa17.63■□□□□ 0.41
TNFRSF1A-201ENST00000162749 HES7Q9BYE0 225 aa17.63■□□□□ 0.41
TNFRSF1A-201ENST00000162749 ZFP64Q9NPA5 681 aa17.63■□□□□ 0.41
TNFRSF1A-201ENST00000162749 CRNNQ9UBG3 495 aaPredicted RBP17.63■□□□□ 0.41
TNFRSF1A-201ENST00000162749 CDV3Q9UKY7 258 aaKnown RBP17.63■□□□□ 0.41
TNFRSF1A-201ENST00000162749 PCDHGB7Q9Y5F8 929 aa17.63■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SPTBN4Q9H254 2564 aa17.63■□□□□ 0.41
TNFRSF1A-201ENST00000162749 DMXL2Q8TDJ6 3036 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 A6NL46 340 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 ZNF814B7Z6K7 855 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SULT2B1O00204 365 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 OR2T7P0C7T2 308 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 RRADP55042 308 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SOX8P57073 446 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 OR2B6P58173 313 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SPANXN2Q5MJ10 180 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 C22orf42Q6IC83 251 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 YRDCQ86U90 279 aaKnown RBP17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 KLBQ86Z14 1044 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SLC35F2Q8IXU6 374 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 ZFP41Q8N8Y5 198 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 POC5Q8NA72 575 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 OR2T27Q8NH04 317 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 ASB10Q8WXI3 467 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 TPK1Q9H3S4 243 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SP140LQ9H930 580 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 MED29Q9NX70 200 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 VSX1Q9NZR4 365 aaPredicted RBP17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 ZMIZ1Q9ULJ6 1067 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 ACACAQ13085 2346 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 BOD1L1Q8NFC6 3051 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 NPIPA5E9PKD4 350 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 CDRT1O95170 752 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 DAP3P51398 398 aaKnown RBP17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 MXD1Q05195 221 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SLC35D2Q76EJ3 337 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 WDFY1Q8IWB7 410 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 OR2M7Q8NG81 312 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 UFD1Q92890 307 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 AGAP4Q96P64 663 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 FAM173AQ9BQD7 235 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SLC30A2Q9BRI3 323 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 RERGLQ9H628 205 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 BOKQ9UMX3 212 aaPredicted RBP17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 NPIPA1Q9UND3 350 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 NOX1Q9Y5S8 564 aa17.62■□□□□ 0.41
TNFRSF1A-201ENST00000162749 APC2O95996 2303 aa17.61■□□□□ 0.41
TNFRSF1A-201ENST00000162749 PHF3Q92576 2039 aaKnown RBP17.61■□□□□ 0.41
TNFRSF1A-201ENST00000162749 PMS2P2O95744 297 aa17.61■□□□□ 0.41
TNFRSF1A-201ENST00000162749 CLEC2LP0C7M8 214 aa17.61■□□□□ 0.41
TNFRSF1A-201ENST00000162749 RAC1P63000 192 aa17.61■□□□□ 0.41
TNFRSF1A-201ENST00000162749 NHLRC1Q6VVB1 395 aa17.61■□□□□ 0.41
TNFRSF1A-201ENST00000162749 OR14L1PQ8NHC6 308 aa17.61■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SLC25A46Q96AG3 418 aa17.61■□□□□ 0.41
TNFRSF1A-201ENST00000162749 TXNDC15Q96J42 360 aa17.61■□□□□ 0.41
TNFRSF1A-201ENST00000162749 TM9SF2Q99805 663 aa17.61■□□□□ 0.41
TNFRSF1A-201ENST00000162749 TTTY10Q9BZA0 68 aa17.61■□□□□ 0.41
TNFRSF1A-201ENST00000162749 FKBP7Q9Y680 259 aa17.61■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SLC22A23A1A5C7 686 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 KLK2P20151 261 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 ZNF239Q16600 458 aaKnown RBP17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 HTRA1Q92743 480 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 BABAM2Q9NXR7 383 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 COPS3Q9UNS2 423 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SPENQ96T58 3664 aaKnown RBP17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 RAMP1O60894 148 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 IL1AP01583 271 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SPNP16150 400 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 CTLA4P16410 223 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 CELP19835 753 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 GDF1P27539 372 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 OR12D2P58182 307 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SLC35A1P78382 337 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 BDH1Q02338 343 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 CLN3Q13286 438 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 TIGD4Q8IY51 512 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 C4orf36Q96KX1 117 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 CEP19Q96LK0 163 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 B9D1Q9UPM9 204 aa17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 MRPS18CQ9Y3D5 142 aaKnown RBP17.6■□□□□ 0.41
TNFRSF1A-201ENST00000162749 IQCMA0A1B0GVH7 501 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 TRABD2BA6NFA1 517 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 AQP7P3A6NL99 342 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 LOC110117498-PIK3R3F6TDL0 507 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 TRAPPC6AO75865 159 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 MT-ND5P03915 603 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 H3F3AP84243 136 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 FABP5Q01469 135 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 VASNQ6EMK4 673 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 GPAT4Q86UL3 456 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SULF2Q8IWU5 870 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 LAX1Q8IWV1 398 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SYT14Q8NB59 555 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms