RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 HLA-DQA2P01906 255 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 CD14P08571 375 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 PSMB1P20618 241 aaKnown RBP11.9□□□□□ -0.5
CTNS-201ENST00000046640 NXPH1P58417 271 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 RPS4XP62701 263 aaKnown RBP11.9□□□□□ -0.5
CTNS-201ENST00000046640 TAGLNQ01995 201 aaKnown RBP11.9□□□□□ -0.5
CTNS-201ENST00000046640 PLA2G7Q13093 441 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 OPCMLQ14982 345 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 LINC00303Q3SY05 128 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 FNDC7Q5VTL7 733 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 SLC22A10Q63ZE4 541 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 ALKAL2Q6UX46 152 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 PM20D2Q8IYS1 436 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 SLC25A45Q8N413 288 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 SFXN2Q96NB2 322 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 SYNDIG1Q9H7V2 258 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 UBE2ZQ9H832 354 aaPredicted RBP11.9□□□□□ -0.5
CTNS-201ENST00000046640 ZNF304Q9HCX3 659 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 FSCN3Q9NQT6 498 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 MAB21L2Q9Y586 359 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 PCDHGA9Q9Y5G4 932 aaKnown RBP11.9□□□□□ -0.5
CTNS-201ENST00000046640 FKBP7Q9Y680 259 aa11.9□□□□□ -0.5
CTNS-201ENST00000046640 ARPC3O15145 178 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 GLCEO94923 617 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 MAS1P04201 325 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 HIST1H2ABP04908 130 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 CXCR1P25024 350 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 ADH7P40394 386 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 PSMA6P60900 246 aaKnown RBP11.89□□□□□ -0.51
CTNS-201ENST00000046640 PLCXD2Q0VAA5 305 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 MESTQ5EB52 335 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 UBE2NLQ5JXB2 153 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 TMEM69Q5SWH9 247 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 RPL22L1Q6P5R6 122 aaKnown RBP11.89□□□□□ -0.51
CTNS-201ENST00000046640 HIST3H2AQ7L7L0 130 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 ADAMTS18Q8TE60 1221 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 HIST1H2ACQ93077 130 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 ADIPOR1Q96A54 375 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 SLC46A1Q96NT5 459 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 TSPAN32Q96QS1 320 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 TRAF4Q9BUZ4 470 aaPredicted RBP11.89□□□□□ -0.51
CTNS-201ENST00000046640 TBL1XR1Q9BZK7 514 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 OR11A1Q9GZK7 315 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 COPZ2Q9P299 210 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 GTF2A1LQ9UNN4 478 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 MED12Q93074 2177 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 A0A1B0GVI7 797 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 DOK2O60496 412 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 DCNP07585 359 aaKnown RBP11.89□□□□□ -0.51
CTNS-201ENST00000046640 IFI6P09912 130 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 PNMTP11086 282 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 CXCL2P19875 107 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 FBLP22087 321 aaKnown RBP11.89□□□□□ -0.51
CTNS-201ENST00000046640 YOD1Q5VVQ6 348 aaPredicted RBP11.89□□□□□ -0.51
CTNS-201ENST00000046640 LIPNQ5VXI9 398 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 FAM199XQ6PEV8 388 aaPredicted RBP11.89□□□□□ -0.51
CTNS-201ENST00000046640 SLC35D2Q76EJ3 337 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 FAM122BQ7Z309 247 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 SLITRK4Q8IW52 837 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 HAVCR2Q8TDQ0 301 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 RGP1Q92546 391 aaPredicted RBP11.89□□□□□ -0.51
CTNS-201ENST00000046640 ZNF578Q96N58 590 aaPredicted RBP11.89□□□□□ -0.51
CTNS-201ENST00000046640 GINS4Q9BRT9 223 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 NMNAT2Q9BZQ4 307 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 SLC7A5P2Q9GIP4 190 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 MS4A7Q9GZW8 240 aaPredicted RBP11.89□□□□□ -0.51
CTNS-201ENST00000046640 ANKRD10Q9NXR5 420 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 L7N2F9 121 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 KRT33AO76009 404 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 IGKV3-11P04433 115 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 RLN1P04808 185 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 FBXO45P0C2W1 286 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 DMWDQ09019 674 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 BTN1A1Q13410 526 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 EBPQ15125 230 aaKnown RBP11.89□□□□□ -0.51
CTNS-201ENST00000046640 TSSK4Q6SA08 328 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 SYS1Q8N2H4 156 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 OR10AC1Q8NH08 325 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 FCAMRQ8WWV6 532 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 SLC25A38Q96DW6 304 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 CXorf58Q96LI9 332 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 OR1F2PQ96R84 312 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 NPAS1Q99742 590 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 VN1R1Q9GZP7 353 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 FGF21Q9NSA1 209 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 TAS2R10Q9NYW0 307 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 HIF3AQ9Y2N7 669 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 PCDHGA5Q9Y5G8 931 aa11.89□□□□□ -0.51
CTNS-201ENST00000046640 TRAV1-2A0A0B4J238 106 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 FITM1A5D6W6 292 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 ARPC5O15511 151 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 AKR7A3O95154 331 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 ASAH2BP0C7U1 165 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 NAGAP17050 411 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 CDK2P24941 298 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 SDHAP31040 664 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 MELKQ14680 651 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 ZMYND11Q15326 602 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 ETFDHQ16134 617 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms