RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Chmp1b2Q9CQD4 199 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 PmpcaQ9DC61 524 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Tcea2Q9QVN7 299 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Jbts17Q8CE72 3214 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Tcrg-V7A0A0A6YYE8 116 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Igkv12-44A0A140T8M2 115 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 4930402F06RikA2AUQ8 332 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 RrasP10833 218 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 MagP20917 626 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Grxcr2Q3TYR5 254 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Eif1aQ60872 144 aaKnown RBP15.02■□□□□ -0
Shh-201ENSMUST00000002708 Nr0b1Q61066 472 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Lcn12Q6JVL5 193 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 RgmaQ6PCX7 454 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Eci3Q78JN3 317 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 H2-M10.5Q85ZW7 330 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Tmem222Q8BVA2 208 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Gpr157Q8C206 330 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Esrp2Q8K0G8 717 aaKnown RBP15.02■□□□□ -0
Shh-201ENSMUST00000002708 Olfr883Q8VF64 309 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Olfr229Q8VFN5 307 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Cdhr1Q8VHP6 859 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Clint1Q99KN9 631 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Yipf2Q99LP8 312 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Lap3Q9CPY7 519 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Ndrg2Q9QYG0 371 aaKnown RBP15.02■□□□□ -0
Shh-201ENSMUST00000002708 Bpnt1Q9Z0S1 308 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Gm21797J3QNW5 180 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Vmn1r86L7N213 316 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Irs3O54718 495 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Slc6a1P31648 599 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Sox7P40646 380 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Lefty2P57785 368 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 D17Wsu92eQ3TT38 291 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 ArsgQ3TYD4 525 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Akt2Q60823 481 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 ShhQ62226 437 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Doc2aQ7TNF0 405 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Spaca9Q7TPM5 168 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 P4htmQ8BG58 503 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Saysd1Q8K190 188 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Cd177Q8R2S8 817 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Ppp1r14cQ8R4S0 164 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Olfr1151Q8VFQ8 308 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Olfr734Q8VFT4 313 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Olfr799Q8VGI7 311 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 AldobQ91Y97 364 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 AspnQ99MQ4 373 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Q9D8N1 392 aa15.02■□□□□ -0
Shh-201ENSMUST00000002708 Parp4E9PYK3 1969 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 Calhm1D3Z291 348 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 Esp36G3UZD8 160 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 Gm20696H3BJN7 74 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 PhyhO35386 338 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 FxnO35943 207 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 Lin7bO88951 207 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 Camk2aP11798 478 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 Pou3f1P21952 449 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 Obox3Q3UT54 335 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 Taar7dQ5QD10 358 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 Gfm1Q8K0D5 751 aaKnown RBP15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 Epsti1Q8VDI1 314 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 Duoxa1Q8VE49 341 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 B3galnt1Q920V1 331 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 Mfap5Q9QZJ6 164 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 AireQ9Z0E3 552 aa15.02□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr1223A0A1L1SU13 311 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr115B2RTB9 312 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Ier3P46694 153 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Adamts15P59384 950 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Tmem217Q14AF1 189 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Mgat4aQ812G0 535 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Phf21bQ8C966 487 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Tmem242Q8VCR3 140 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Oasl1Q8VI94 511 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 LsrQ99KG5 594 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Gm10762Q9CZN6 115 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Cthrc1Q9D1D6 245 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr110A2RT31 317 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 AcheP21836 614 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Clk1P22518 483 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Gabrg2P22723 474 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 DtymkP97930 212 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Slc35f3Q1LZI2 421 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Ndufb6Q3UIU2 128 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr1229Q7TQZ9 311 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr111Q7TRK1 317 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Ticam1Q80UF7 732 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Plekhm3Q8BM47 761 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Rfwd3Q8CIK8 774 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Mmd2Q8R189 247 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Nkd2Q8VE28 461 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Zfp810Q99K45 461 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Q9CQT6 229 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Shisa5Q9D7I0 235 aa15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 HelzQ6DFV5 1964 aaKnown RBP15.01□□□□□ -0.01
Shh-201ENSMUST00000002708 Olfr1193A2AV13 318 aa15□□□□□ -0.01
Shh-201ENSMUST00000002708 Fbxw15L7N1X6 466 aa15□□□□□ -0.01
Shh-201ENSMUST00000002708 Dpm1O70152 260 aa15□□□□□ -0.01
Shh-201ENSMUST00000002708 P01851 173 aa15□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms