RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 TVP23BQ9NYZ1 205 aa10.91□□□□□ -0.66
LINC00339-213ENST00000642137 Q9UFV3 132 aa10.91□□□□□ -0.66
LINC00339-213ENST00000642137 SURF4O15260 269 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 LRRTM2O43300 516 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 CNOT4O95628 575 aaKnown RBP10.9□□□□□ -0.66
LINC00339-213ENST00000642137 IFNGP01579 166 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 PGA4P0DJD7 388 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 PGA3P0DJD8 388 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 CD8BP10966 210 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 NR2C1P13056 603 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 CAPGP40121 348 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 HSPA13P48723 471 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 AQP4P55087 323 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 CDC42P60953 191 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 SIRPAP78324 504 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 RUNX1T1Q06455 604 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.9□□□□□ -0.66
LINC00339-213ENST00000642137 KRR1Q13601 381 aaKnown RBP10.9□□□□□ -0.66
LINC00339-213ENST00000642137 SNAPC1Q16533 368 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 HIST3H3Q16695 136 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 MESTQ5EB52 335 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 THEM4Q5T1C6 240 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 SLC35F1Q5T1Q4 408 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 VWA1Q6PCB0 445 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 BTLAQ7Z6A9 289 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 ADCK1Q86TW2 530 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 JAZF1Q86VZ6 243 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 WDFY1Q8IWB7 410 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 POMGNT2Q8NAT1 580 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 NPEPL1Q8NDH3 523 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 OR52E2Q8NGJ4 325 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 OR4K13Q8NH42 304 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 TFAP2CQ92754 450 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 APH1AQ96BI3 265 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 RASD2Q96D21 266 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 ADI1Q9BV57 179 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 PIGMQ9H3S5 423 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 GLTPQ9NZD2 209 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 VSX1Q9NZR4 365 aaPredicted RBP10.9□□□□□ -0.66
LINC00339-213ENST00000642137 ERRFI1Q9UJM3 462 aaPredicted RBP10.9□□□□□ -0.66
LINC00339-213ENST00000642137 FOXD3Q9UJU5 478 aaPredicted RBP10.9□□□□□ -0.66
LINC00339-213ENST00000642137 PROCRQ9UNN8 238 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 GMPPBQ9Y5P6 360 aa10.9□□□□□ -0.66
LINC00339-213ENST00000642137 SPENQ96T58 3664 aaKnown RBP10.89□□□□□ -0.67
LINC00339-213ENST00000642137 INTS1Q8N201 2190 aaKnown RBP10.89□□□□□ -0.67
LINC00339-213ENST00000642137 PRSS37A4D1T9 235 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 RENP00797 406 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 CSNK1A1P48729 337 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 ZNF133P52736 654 aaPredicted RBP10.89□□□□□ -0.67
LINC00339-213ENST00000642137 CLRN1P58418 232 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 ADORA2A-AS1P86434 159 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 ITGADQ13349 1161 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 IL18R1Q13478 541 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 TSPO2Q5TGU0 170 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 CARD17Q5XLA6 110 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 FBXW9Q5XUX1 488 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 LEG1Q6P5S2 330 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 IZUMO2Q6UXV1 221 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 NCCRP1Q6ZVX7 275 aaPredicted RBP10.89□□□□□ -0.67
LINC00339-213ENST00000642137 PTCHD4Q6ZW05 846 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 DEPDC4Q8N2C3 294 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 SLC37A3Q8NCC5 494 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 OR6N1Q8NGY5 312 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 CYGBQ8WWM9 190 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 ASB5Q8WWX0 329 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 CCDC120Q96HB5 630 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 PLEKHA8Q96JA3 519 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 NMNAT3Q96T66 252 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 SLCO5A1Q9H2Y9 848 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 FN3KQ9H479 309 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 C12orf49Q9H741 205 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 B3GAT2Q9NPZ5 323 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 COQ3Q9NZJ6 369 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 UPB1Q9UBR1 384 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 RNF6Q9Y252 685 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 SLC5A6Q9Y289 635 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 FREM1Q5H8C1 2179 aa10.89□□□□□ -0.67
LINC00339-213ENST00000642137 SLC22A23A1A5C7 686 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 OR6C68A6NDL8 312 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 RIIAD1A6NNX1 92 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 RPL36A-HNRNPH2H7BZ11 118 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 DVL2O14641 736 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 MSTNO14793 375 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 MPZL2O60487 215 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 UPK3AO75631 287 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 SLC2A10O95528 541 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 QDPRP09417 244 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 ZNF3P17036 446 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 EDNRAP25101 427 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 PCYT1AP49585 367 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 STK11Q15831 433 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 PHYHD1Q5SRE7 291 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 ZNF691Q5VV52 312 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 LRFN4Q6PJG9 635 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 SLC25A47Q6Q0C1 308 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 TFAP2EQ6VUC0 442 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 BEND4Q6ZU67 534 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 ABHD12BQ7Z5M8 362 aaPredicted RBP10.88□□□□□ -0.67
LINC00339-213ENST00000642137 CCDC71Q8IV32 467 aaPredicted RBP10.88□□□□□ -0.67
LINC00339-213ENST00000642137 GPR137CQ8N3F9 429 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms