RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 H0YAE9 185 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 ARPC3O15145 178 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 LRRTM2O43300 516 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 TRAF3IP2O43734 574 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-218ENST00000641491 AHCYL1O43865 530 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 RAMP1O60894 148 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 HLA-DQA2P01906 255 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 HLA-DOBP13765 273 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 ACADSP16219 412 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 ZNF26P17031 533 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-218ENST00000641491 BMP5P22003 454 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 CRABP1P29762 137 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 P2RY4P51582 365 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 IL18R1Q13478 541 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 KEAP1Q14145 624 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 C4orf17Q53FE4 359 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 LCN1P1Q5VSP4 162 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 CHERPQ8IWX8 916 aaKnown RBP11.51□□□□□ -0.57
PHGDH-218ENST00000641491 C8orf59Q8N0T1 100 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-218ENST00000641491 LNX2Q8N448 690 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 SYT14Q8NB59 555 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 SDR9C7Q8NEX9 313 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 PROKR2Q8NFJ6 384 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 OR4K13Q8NH42 304 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 RASD2Q96D21 266 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 Q96M85 177 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 Q96MT0 163 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 ENKD1Q9H0I2 346 aa11.51□□□□□ -0.57
PHGDH-218ENST00000641491 USP9YO00507 2555 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-218ENST00000641491 NCKAP5O14513 1909 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 ZAR1LA6NP61 321 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 BHLHE40O14503 412 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 IGFBP1P08833 259 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-218ENST00000641491 TSPAN19P0C672 248 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 HIST1H1CP16403 213 aaKnown RBP11.5□□□□□ -0.57
PHGDH-218ENST00000641491 KLK2P20151 261 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 CHRNB4P30926 498 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 GGT2P36268 569 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 PCYT1AP49585 367 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 TGFBR3Q03167 851 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 KLHL12Q53G59 568 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 THEM4Q5T1C6 240 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 SLX4IPQ5VYV7 408 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 TMEM236Q5W0B7 351 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 ANKRD34AQ69YU3 496 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 BEND4Q6ZU67 534 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 LSRQ86X29 649 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-218ENST00000641491 GID4Q8IVV7 300 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 OR8D4Q8NGM9 314 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 OR2T4Q8NH00 348 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 CA5BP1Q8WTZ4 195 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 NRG4Q8WWG1 115 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 RFKQ969G6 155 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 ZNF385AQ96PM9 386 aaKnown RBP11.5□□□□□ -0.57
PHGDH-218ENST00000641491 OR2M2Q96R28 347 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 KCNN2Q9H2S1 579 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 CMC2Q9NRP2 79 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 FAM118AQ9NWS6 357 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 CLN6Q9NWW5 311 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 B3GAT1Q9P2W7 334 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 ZNF629Q9UEG4 869 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-218ENST00000641491 ERRFI1Q9UJM3 462 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-218ENST00000641491 SLC5A6Q9Y289 635 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 POLR1DQ9Y2S0 133 aa11.5□□□□□ -0.57
PHGDH-218ENST00000641491 TEP1Q99973 2627 aaKnown RBP11.49□□□□□ -0.57
PHGDH-218ENST00000641491 PRSS37A4D1T9 235 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 H7C1C5 153 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 TLX2O43763 284 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-218ENST00000641491 TRMUO75648 421 aaKnown RBP11.49□□□□□ -0.57
PHGDH-218ENST00000641491 FARS2O95363 451 aaKnown RBP11.49□□□□□ -0.57
PHGDH-218ENST00000641491 TXNDC12O95881 172 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 IL18BPO95998 194 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 ATP6V1E1P36543 226 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 SELENOPP49908 381 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 LCN6P62502 163 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 CDK5Q00535 292 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 RTL6Q6ICC9 239 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 KLHL24Q6TFL4 600 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 CXXC5Q7LFL8 322 aaKnown RBP11.49□□□□□ -0.57
PHGDH-218ENST00000641491 TCEANCQ8N8B7 351 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 LRRC75AQ8NAA5 344 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 OR10H5Q8NGA6 315 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 OR8J1Q8NGP2 316 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 OR4Q3Q8NH05 313 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 TRUB1Q8WWH5 349 aaKnown RBP11.49□□□□□ -0.57
PHGDH-218ENST00000641491 TXNDC15Q96J42 360 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 LRR1Q96L50 414 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 ALKBH3Q96Q83 286 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-218ENST00000641491 MBOAT4Q96T53 435 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 NMNAT3Q96T66 252 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 RBM24Q9BX46 236 aaKnown RBP11.49□□□□□ -0.57
PHGDH-218ENST00000641491 GRIP2Q9C0E4 1043 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 RPRD1BQ9NQG5 326 aaKnown RBP11.49□□□□□ -0.57
PHGDH-218ENST00000641491 GLTPQ9NZD2 209 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 RAB26Q9ULW5 256 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 RELNP78509 3460 aa11.49□□□□□ -0.57
PHGDH-218ENST00000641491 SPTBN1Q01082 2364 aaKnown RBP11.48□□□□□ -0.57
PHGDH-218ENST00000641491 A0A1W2PPL8 197 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 CIB4A0PJX0 185 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 CLEC18AA5D8T8 446 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms