RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 SH3BGRP55822 239 aaPredicted RBP23.32■■□□□ 1.32
VEGFA-231ENST00000640499 SMIM11AP58511 58 aa23.32■■□□□ 1.32
VEGFA-231ENST00000640499 PRPS1P60891 318 aa23.32■■□□□ 1.32
VEGFA-231ENST00000640499 ZBED5Q49AG3 693 aa23.32■■□□□ 1.32
VEGFA-231ENST00000640499 SSX8Q7RTT4 187 aa23.32■■□□□ 1.32
VEGFA-231ENST00000640499 OR4C15Q8NGM1 316 aa23.32■■□□□ 1.32
VEGFA-231ENST00000640499 HDAC2Q92769 488 aaKnown RBP23.32■■□□□ 1.32
VEGFA-231ENST00000640499 NMD3Q96D46 503 aaKnown RBP23.32■■□□□ 1.32
VEGFA-231ENST00000640499 ULBP2Q9BZM5 246 aa23.32■■□□□ 1.32
VEGFA-231ENST00000640499 ESRP2Q9H6T0 727 aaKnown RBP23.32■■□□□ 1.32
VEGFA-231ENST00000640499 NGBQ9NPG2 151 aa23.32■■□□□ 1.32
VEGFA-231ENST00000640499 ZNF346Q9UL40 294 aaKnown RBP23.32■■□□□ 1.32
VEGFA-231ENST00000640499 POMPQ9Y244 141 aa23.32■■□□□ 1.32
VEGFA-231ENST00000640499 SIGLEC7Q9Y286 467 aa23.32■■□□□ 1.32
VEGFA-231ENST00000640499 TMEM5Q9Y2B1 443 aa23.32■■□□□ 1.32
VEGFA-231ENST00000640499 LYVE1Q9Y5Y7 322 aa23.32■■□□□ 1.32
VEGFA-231ENST00000640499 CREBBPQ92793 2442 aa23.32■■□□□ 1.32
VEGFA-231ENST00000640499 ARPC4-TTLL3A0A0A6YYG9 625 aa23.31■■□□□ 1.32
VEGFA-231ENST00000640499 MCIDASD6RGH6 385 aa23.31■■□□□ 1.32
VEGFA-231ENST00000640499 IGHMP01871 453 aa23.31■■□□□ 1.32
VEGFA-231ENST00000640499 ACADSP16219 412 aa23.31■■□□□ 1.32
VEGFA-231ENST00000640499 IST1P53990 364 aa23.31■■□□□ 1.32
VEGFA-231ENST00000640499 CTXN1P60606 82 aa23.31■■□□□ 1.32
VEGFA-231ENST00000640499 ANKDD1AQ495B1 522 aa23.31■■□□□ 1.32
VEGFA-231ENST00000640499 ZNF627Q7L945 461 aa23.31■■□□□ 1.32
VEGFA-231ENST00000640499 TSPAN32Q96QS1 320 aa23.31■■□□□ 1.32
VEGFA-231ENST00000640499 SLC7A8Q9UHI5 535 aa23.31■■□□□ 1.32
VEGFA-231ENST00000640499 AQP12BA6NM10 295 aa23.3■■□□□ 1.32
VEGFA-231ENST00000640499 SHISA9B4DS77 424 aa23.3■■□□□ 1.32
VEGFA-231ENST00000640499 CD3EP07766 207 aa23.3■■□□□ 1.32
VEGFA-231ENST00000640499 CD40P25942 277 aa23.3■■□□□ 1.32
VEGFA-231ENST00000640499 SPOCK1Q08629 439 aa23.3■■□□□ 1.32
VEGFA-231ENST00000640499 THSD4Q6ZMP0 1018 aa23.3■■□□□ 1.32
VEGFA-231ENST00000640499 AQP12AQ8IXF9 295 aa23.3■■□□□ 1.32
VEGFA-231ENST00000640499 SYT14Q8NB59 555 aa23.3■■□□□ 1.32
VEGFA-231ENST00000640499 ZNF519Q8TB69 540 aa23.3■■□□□ 1.32
VEGFA-231ENST00000640499 LRGUKQ96M69 825 aa23.3■■□□□ 1.32
VEGFA-231ENST00000640499 B3GAT2Q9NPZ5 323 aa23.3■■□□□ 1.32
VEGFA-231ENST00000640499 CCM2LQ9NUG4 571 aaPredicted RBP23.3■■□□□ 1.32
VEGFA-231ENST00000640499 RNF115Q9Y4L5 304 aa23.3■■□□□ 1.32
VEGFA-231ENST00000640499 IGKV1D-43A0A0B4J1Z2 117 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 IGHG1P01857 330 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 QDPRP09417 244 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 HOXB1P14653 301 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-231ENST00000640499 CD53P19397 219 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 DAP3P51398 398 aaKnown RBP23.29■■□□□ 1.32
VEGFA-231ENST00000640499 ZNF133P52736 654 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-231ENST00000640499 RPL27P61353 136 aaKnown RBP23.29■■□□□ 1.32
VEGFA-231ENST00000640499 MYBPC1Q00872 1141 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 CHRNB3Q05901 458 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 PPP1R8Q12972 351 aaKnown RBP23.29■■□□□ 1.32
VEGFA-231ENST00000640499 TOP3AQ13472 1001 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-231ENST00000640499 C1QTNF12Q5T7M4 302 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 ZNF770Q6IQ21 691 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-231ENST00000640499 ADAM5Q6NVV9 412 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 CLDN22Q8N7P3 220 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 KBTBD8Q8NFY9 601 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 CANT1Q8WVQ1 401 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 IGFBPL1Q8WX77 278 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 MCHR2Q969V1 340 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 UBTD1Q9HAC8 227 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 OBP2BQ9NPH6 170 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 ZNF224Q9NZL3 707 aa23.29■■□□□ 1.32
VEGFA-231ENST00000640499 M0R1B8 84 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 KRT36O76013 467 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 ERVK-25P63136 954 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 FAM98BQ52LJ0 330 aaKnown RBP23.28■■□□□ 1.32
VEGFA-231ENST00000640499 PGBD2Q6P3X8 592 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 FAM122BQ7Z309 247 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 NOXO1Q8NFA2 376 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 AKAP1Q92667 903 aaKnown RBP eCLIP23.28■■□□□ 1.32
VEGFA-231ENST00000640499 NINJ1Q92982 152 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 RSRC1Q96IZ7 334 aaKnown RBP23.28■■□□□ 1.32
VEGFA-231ENST00000640499 KCNK17Q96T54 332 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 FOXB1Q99853 325 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 KATNB1Q9BVA0 655 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 CHID1Q9BWS9 393 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 SEC61A2Q9H9S3 476 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 NOX3Q9HBY0 568 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 B3GNT2Q9NY97 397 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 CRNNQ9UBG3 495 aaPredicted RBP23.28■■□□□ 1.32
VEGFA-231ENST00000640499 POFUT2Q9Y2G5 429 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 ADAM18Q9Y3Q7 739 aa23.28■■□□□ 1.32
VEGFA-231ENST00000640499 TCRBV3S1A0A5B6 114 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 UNC119BA6NIH7 251 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 CENPBD1B2RD01 187 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 TNFRSF11BO00300 401 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 ABCD4O14678 606 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 DHHO43323 396 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 ATP5HO75947 161 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 WNT11O96014 354 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 RAF1P04049 648 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 RAP2AP10114 183 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 B4GALT1P15291 398 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 GSSP48637 474 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 TAF11Q15544 211 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 TESK1Q15569 626 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 C1orf94Q6P1W5 598 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 KLHL24Q6TFL4 600 aa23.27■■□□□ 1.32
VEGFA-231ENST00000640499 ZNF813Q6ZN06 617 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms