RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 IL32P24001 234 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 MPGP29372 298 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 SLC6A6P31641 620 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 DAPP51397 102 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 CLRN1P58418 232 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 LCN6P62502 163 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 FMODQ06828 376 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 CEACAM16Q2WEN9 425 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 MESTQ5EB52 335 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 CD300LDQ6UXZ3 194 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 HIPK1Q86Z02 1210 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 ATG16L2Q8NAA4 619 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 STMN2Q93045 179 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 KISS1RQ969F8 398 aaPredicted RBP11.61□□□□□ -0.55
GTF3A-209ENST00000640289 S100PBPQ96BU1 408 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 LRR1Q96L50 414 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 ZNF570Q96NI8 536 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 WFIKKN1Q96NZ8 548 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 ERMAPQ96PL5 475 aaPredicted RBP11.61□□□□□ -0.55
GTF3A-209ENST00000640289 KCNK17Q96T54 332 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 ULBP2Q9BZM5 246 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 NDEL1Q9GZM8 345 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 ACTR6Q9GZN1 396 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 SMURF2Q9HAU4 748 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 TBC1D23Q9NUY8 699 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 IL20Q9NYY1 176 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 GRHPRQ9UBQ7 328 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 REV1Q9UBZ9 1251 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 OAZ3Q9UMX2 235 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 GPR52Q9Y2T5 361 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 FLNCQ14315 2725 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 DOPEY1Q5JWR5 2465 aa11.61□□□□□ -0.55
GTF3A-209ENST00000640289 IGKV1D-43A0A0B4J1Z2 117 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 A0A1W2PR80 420 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 CIB4A0PJX0 185 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 TUBAL3A6NHL2 446 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 RPL36A-HNRNPH2H7BZ11 118 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 SOCS2O14508 198 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 IMPA2O14732 288 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 ARHGEF9O43307 516 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 MITFO75030 526 aaPredicted RBP11.6□□□□□ -0.55
GTF3A-209ENST00000640289 SEC14L2O76054 403 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 QDPRP09417 244 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 SDHAP31040 664 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 PCYT1AP49585 367 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 RPS6KA3P51812 740 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 ARF1P84077 181 aaKnown RBP11.6□□□□□ -0.55
GTF3A-209ENST00000640289 COX10Q12887 443 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 KRR1Q13601 381 aaKnown RBP11.6□□□□□ -0.55
GTF3A-209ENST00000640289 STK11Q15831 433 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 GABRA6Q16445 453 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 HIST3H3Q16695 136 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 SLC36A3Q495N2 470 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 FAHD1Q6P587 224 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 LRFN4Q6PJG9 635 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 HDDC2Q7Z4H3 204 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 ABHD12BQ7Z5M8 362 aaPredicted RBP11.6□□□□□ -0.55
GTF3A-209ENST00000640289 ZDHHC13Q8IUH4 622 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 SVOPLQ8N434 492 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 ARIH2OSQ8N7S6 290 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 OR52L1Q8NGH7 329 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 MAGEE2Q8TD90 523 aaPredicted RBP11.6□□□□□ -0.55
GTF3A-209ENST00000640289 MCHR2Q969V1 340 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 ZC3HAV1LQ96H79 300 aaKnown RBP11.6□□□□□ -0.55
GTF3A-209ENST00000640289 SPOCK3Q9BQ16 436 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 TSSK6Q9BXA6 273 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 HDHD5Q9BXW7 423 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 GABARAPL1Q9H0R8 117 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 ZNF556Q9HAH1 456 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 B3GAT2Q9NPZ5 323 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 CRIM1Q9NZV1 1036 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 KIF17Q9P2E2 1029 aa11.6□□□□□ -0.55
GTF3A-209ENST00000640289 SH3D21A4FU49 640 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 A6NIZ1 184 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 H3BN98 237 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 BHLHE40O14503 412 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 SLC2A10O95528 541 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 BAG2O95816 211 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 TXNDC12O95881 172 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 THBDP07204 575 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 COX6B1P14854 86 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 POU1F1P28069 291 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 KIR2DL3P43628 341 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 RAP1BP61224 184 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 RAP1AP62834 184 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 ELF3P78545 371 aaPredicted RBP11.59□□□□□ -0.55
GTF3A-209ENST00000640289 CD47Q08722 323 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 DBPQ10586 325 aaPredicted RBP11.59□□□□□ -0.55
GTF3A-209ENST00000640289 HIKESHIQ53FT3 197 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 SLC35F1Q5T1Q4 408 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 FAM205BPQ63HN1 556 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 GPR139Q6DWJ6 353 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 ALKBH2Q6NS38 261 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 RPL13AP3Q6NVV1 102 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 PTCHD4Q6ZW05 846 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 ZNF771Q7L3S4 317 aaPredicted RBP11.59□□□□□ -0.55
GTF3A-209ENST00000640289 PQLC1Q8N2U9 271 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 IQCF1Q8N6M8 205 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 STEAP2Q8NFT2 490 aa11.59□□□□□ -0.55
GTF3A-209ENST00000640289 OR1K1Q8NGR3 316 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms