RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 KLKB1P03952 638 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 BAXQ07812 192 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 GLYR1Q49A26 553 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-213ENST00000638680 CD300LGQ6UXG3 332 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 OVCH1Q7RTY7 1134 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 RDH10Q8IZV5 341 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 SLC16A11Q8NCK7 471 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 GSX2Q9BZM3 304 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 TRAPPC2LQ9UL33 140 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 PLEKHM1Q9Y4G2 1056 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 UBR2Q8IWV8 1755 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 MCRIP1C9JLW8 97 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 TUSC2O75896 110 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 TAGLN2P37802 199 aaKnown RBP17.05■□□□□ 0.32
SCARB2-213ENST00000638680 NR0B2Q15466 257 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 VASH1Q7L8A9 365 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-213ENST00000638680 ADGRF3Q8IZF5 1079 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 DCLRE1CQ96SD1 692 aaKnown RBP17.05■□□□□ 0.32
SCARB2-213ENST00000638680 C20orf24Q9BUV8 137 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 LMAN1LQ9HAT1 526 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 PATZ1Q9HBE1 687 aaKnown RBP17.05■□□□□ 0.32
SCARB2-213ENST00000638680 ACOXLQ9NUZ1 547 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 SLC25A37Q9NYZ2 338 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 LRIT1Q9P2V4 623 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 CCL26Q9Y258 94 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 MYO18AQ92614 2054 aaKnown RBP17.05■□□□□ 0.32
SCARB2-213ENST00000638680 IGLV3-10A0A075B6K4 115 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 PLPP1O14494 284 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 DGCR2P98153 550 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 ZNF808Q8N4W9 903 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-213ENST00000638680 TMEM99Q8N816 258 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 OR6M1Q8NGM8 313 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 OR52I2Q8NH67 350 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 ATP13A2Q9NQ11 1180 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 SLC39A9Q9NUM3 307 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 OR52A1Q9UKL2 312 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 NWD2Q9ULI1 1742 aa17.05■□□□□ 0.32
SCARB2-213ENST00000638680 CSNK1G2P78368 415 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 LTC4SQ16873 150 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 YOD1Q5VVQ6 348 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-213ENST00000638680 TMEM64Q6YI46 380 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 TSSK2Q96PF2 358 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 TEAD3Q99594 435 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 DNMT3BQ9UBC3 853 aaKnown RBP17.04■□□□□ 0.32
SCARB2-213ENST00000638680 CGGBP1Q9UFW8 167 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-213ENST00000638680 GIPP09681 153 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-213ENST00000638680 C14orf79Q96F83 325 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 CORINQ9Y5Q5 1042 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 TOPAZ1Q8N9V7 1692 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 HCRTR1O43613 425 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 OR13C7P0DN81 318 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 SAXO2Q658L1 398 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 ABHD17CQ6PCB6 329 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 DMBX1Q8NFW5 382 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 NIPSNAP3BQ9BS92 247 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 CDCA4Q9BXL8 241 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 GABARAPH6UMI1 98 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 PAN3Q58A45 887 aaKnown RBP17.04■□□□□ 0.32
SCARB2-213ENST00000638680 SLC22A12Q96S37 553 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 MUTYHQ9UIF7 546 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 BHLHE40O14503 412 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 CD14P08571 375 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 DPP4P27487 766 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 HCCSP53701 268 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 TMEM41BQ5BJD5 291 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 FJX1Q86VR8 437 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 UHRF2Q96PU4 802 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 TAF9BQ9HBM6 251 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 TM7SF3Q9NS93 570 aa17.04■□□□□ 0.32
SCARB2-213ENST00000638680 BCKDHBP21953 392 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 SLC6A18Q96N87 628 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 GABRA2P47869 451 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 MRPL19P49406 292 aaKnown RBP17.03■□□□□ 0.32
SCARB2-213ENST00000638680 HBG1P69891 147 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 HBG2P69892 147 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 H3F3CQ6NXT2 135 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 ZNF705AQ6ZN79 300 aaPredicted RBP17.03■□□□□ 0.32
SCARB2-213ENST00000638680 NKAIN3Q8N8D7 197 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 PIGMQ9H3S5 423 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 RPH3ALQ9UNE2 315 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 MFAP5Q13361 173 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 GLIPR1L1Q6UWM5 242 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 C5orf46Q6UWT4 87 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 ADAMTSL4Q6UY14 1074 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 DOT1LQ8TEK3 1739 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 TMEM202A6NGA9 273 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 TMEM200CA6NKL6 621 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 IMPA2O14732 288 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 MRPL33O75394 65 aaKnown RBP17.03■□□□□ 0.32
SCARB2-213ENST00000638680 PTGER4P35408 488 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 ACSM5Q6NUN0 579 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 RIMKLAQ8IXN7 391 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 OLIG1Q8TAK6 271 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 YIPF6Q96EC8 236 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 TNFRSF12AQ9NP84 129 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 RGPD1P0DJD0 1748 aa17.03■□□□□ 0.32
SCARB2-213ENST00000638680 SLC2A10O95528 541 aa17.02■□□□□ 0.32
SCARB2-213ENST00000638680 SRPXP78539 464 aa17.02■□□□□ 0.32
SCARB2-213ENST00000638680 ZNF266Q14584 549 aa17.02■□□□□ 0.32
SCARB2-213ENST00000638680 NLRC3Q7RTR2 1065 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms