RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 YAP1P46937 504 aaKnown RBP12□□□□□ -0.49
PNKP-228ENST00000637325 GSK3BP49841 420 aa12□□□□□ -0.49
PNKP-228ENST00000637325 CLRN1P58418 232 aa12□□□□□ -0.49
PNKP-228ENST00000637325 PSME3P61289 254 aa12□□□□□ -0.49
PNKP-228ENST00000637325 SNRPD2P62316 118 aaKnown RBP12□□□□□ -0.49
PNKP-228ENST00000637325 GNGT1P63211 74 aa12□□□□□ -0.49
PNKP-228ENST00000637325 RPL18Q07020 188 aaKnown RBP12□□□□□ -0.49
PNKP-228ENST00000637325 PIGFQ07326 219 aa12□□□□□ -0.49
PNKP-228ENST00000637325 GSG1Q2KHT4 349 aa12□□□□□ -0.49
PNKP-228ENST00000637325 IFI44LQ53G44 452 aa12□□□□□ -0.49
PNKP-228ENST00000637325 HDDC2Q7Z4H3 204 aa12□□□□□ -0.49
PNKP-228ENST00000637325 VTCN1Q7Z7D3 282 aa12□□□□□ -0.49
PNKP-228ENST00000637325 WDFY1Q8IWB7 410 aa12□□□□□ -0.49
PNKP-228ENST00000637325 IL17RDQ8NFM7 739 aa12□□□□□ -0.49
PNKP-228ENST00000637325 GEMIN6Q8WXD5 167 aaKnown RBP12□□□□□ -0.49
PNKP-228ENST00000637325 TMEM54Q969K7 222 aa12□□□□□ -0.49
PNKP-228ENST00000637325 SLC25A44Q96H78 314 aaPredicted RBP12□□□□□ -0.49
PNKP-228ENST00000637325 FOXB1Q99853 325 aa12□□□□□ -0.49
PNKP-228ENST00000637325 REG4Q9BYZ8 158 aa12□□□□□ -0.49
PNKP-228ENST00000637325 MYLK2Q9H1R3 596 aa12□□□□□ -0.49
PNKP-228ENST00000637325 SEC61A2Q9H9S3 476 aa12□□□□□ -0.49
PNKP-228ENST00000637325 INIPQ9NRY2 104 aa12□□□□□ -0.49
PNKP-228ENST00000637325 CA10Q9NS85 328 aa12□□□□□ -0.49
PNKP-228ENST00000637325 C20orf141Q9NUB4 165 aa12□□□□□ -0.49
PNKP-228ENST00000637325 SNX3O60493 162 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 ENTPD5O75356 428 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 GMNNO75496 209 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 UBL3O95164 117 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 RAB36O95755 333 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 SERPINA1P01009 418 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 IGF2P01344 180 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 F13BP05160 661 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 IFI30P13284 250 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 DRD4P21917 467 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 PRDX6P30041 224 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 CALCRP30988 508 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 SERPINF1P36955 418 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 AQP2P41181 271 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 C8orf82Q6P1X6 216 aaPredicted RBP11.99□□□□□ -0.49
PNKP-228ENST00000637325 CLEC2AQ6UVW9 174 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 CBLL1Q75N03 491 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 HTRA1Q92743 480 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 ADA2Q9NZK5 511 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 RHCGQ9UBD6 479 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 A4GNTQ9UNA3 340 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 NF1P21359 2839 aa11.99□□□□□ -0.49
PNKP-228ENST00000637325 SONP18583 2426 aaKnown RBP11.98□□□□□ -0.49
PNKP-228ENST00000637325 HTR3EA5X5Y0 456 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 ZNF503-AS2A6NEH8 195 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 B9A039 149 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 H7C417 338 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 DHHO43323 396 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 PIP5K1CO60331 668 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 FARS2O95363 451 aaKnown RBP11.98□□□□□ -0.49
PNKP-228ENST00000637325 QDPRP09417 244 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 OR4A8P0C604 315 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 NCK1P16333 377 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 PTDSS1P48651 473 aaKnown RBP11.98□□□□□ -0.49
PNKP-228ENST00000637325 DAP3P51398 398 aaKnown RBP11.98□□□□□ -0.49
PNKP-228ENST00000637325 GYS2P54840 703 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 DSCR9P59020 149 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 TRAM2Q15035 370 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 ZNF627Q7L945 461 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 PIWIL3Q7Z3Z3 882 aaKnown RBP11.98□□□□□ -0.49
PNKP-228ENST00000637325 MYPOPQ86VE0 399 aaPredicted RBP11.98□□□□□ -0.49
PNKP-228ENST00000637325 CYP4Z1Q86W10 505 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 MAPK1IP1LQ8NDC0 245 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 HSH2DQ96JZ2 352 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 DENND2DQ9H6A0 471 aaPredicted RBP11.98□□□□□ -0.49
PNKP-228ENST00000637325 SPAG4Q9NPE6 437 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 B3GNT2Q9NY97 397 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 STX18Q9P2W9 335 aaKnown RBP11.98□□□□□ -0.49
PNKP-228ENST00000637325 RPS6KA6Q9UK32 745 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 SPEF1Q9Y4P9 236 aa11.98□□□□□ -0.49
PNKP-228ENST00000637325 FN1P02751 2386 aaKnown RBP11.98□□□□□ -0.49
PNKP-228ENST00000637325 IGHV2OR16-5A0A0B4J2B6 119 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 J3KTA2 159 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 PDE5AO76074 875 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 PGA4P0DJD7 388 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 PGA3P0DJD8 388 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 OR8G3PP0DMU2 310 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 SAGP10523 405 aaPredicted RBP11.97□□□□□ -0.49
PNKP-228ENST00000637325 HOXB4P17483 251 aaPredicted RBP11.97□□□□□ -0.49
PNKP-228ENST00000637325 THBS4P35443 961 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 ZNF84P51523 738 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 EFNA4P52798 201 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 RAB1AP62820 205 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 PPP2R2BQ00005 443 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 MYBPC1Q00872 1141 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 HGFACQ04756 655 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 DAG1Q14118 895 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 LAPTM4AQ15012 233 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 SWI5Q1ZZU3 235 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 MST1LQ2TV78 715 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 LRFN4Q6PJG9 635 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 ZNF730Q6ZMV8 503 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 RRM2BQ7LG56 351 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 CDK20Q8IZL9 346 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 OFCC1Q8IZS5 231 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 SLC22A24Q8N4F4 322 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms