RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 ACADSP16219 412 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 GSSP48637 474 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 TSPAN31Q12999 210 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 MICAQ29983 383 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 ANKRD16Q6P6B7 361 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 SMARCD3Q6STE5 483 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 NOXO1Q8NFA2 376 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 OR9Q2Q8NGE9 314 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 OR1K1Q8NGR3 316 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 OR52N5Q8NH56 324 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 TMEM54Q969K7 222 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 SLCO4A1Q96BD0 722 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 GPA33Q99795 319 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 RASSF1Q9NS23 344 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 GLTPQ9NZD2 209 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 ZNF346Q9UL40 294 aaKnown RBP13.59□□□□□ -0.23
CLN6-211ENST00000635754 AMDHD2Q9Y303 409 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 ITPR2Q14571 2701 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 CACNA1DQ01668 2161 aa13.58□□□□□ -0.23
CLN6-211ENST00000635754 FAM221AA4D161 298 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 A6NIZ1 184 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 ZNF99A8MXY4 864 aaPredicted RBP13.58□□□□□ -0.24
CLN6-211ENST00000635754 E2F6O75461 281 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 CD14P08571 375 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 NR2C1P13056 603 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 ZNF26P17031 533 aaPredicted RBP13.58□□□□□ -0.24
CLN6-211ENST00000635754 ACVR1BP36896 505 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 RAP1BP61224 184 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 RAP1AP62834 184 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 ERVK-25P63136 954 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 ARF1P84077 181 aaKnown RBP13.58□□□□□ -0.24
CLN6-211ENST00000635754 CCNIQ14094 377 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 BEX5Q5H9J7 111 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 ARMC4Q5T2S8 1044 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 C1QTNF12Q5T7M4 302 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 YTHDF3Q7Z739 585 aaKnown RBP13.58□□□□□ -0.24
CLN6-211ENST00000635754 PIK3IP1Q96FE7 263 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 BOD1Q96IK1 185 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 TSPAN32Q96QS1 320 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 GPX7Q96SL4 187 aaPredicted RBP13.58□□□□□ -0.24
CLN6-211ENST00000635754 CLEC4MQ9H2X3 399 aaPredicted RBP13.58□□□□□ -0.24
CLN6-211ENST00000635754 SLC17A5Q9NRA2 495 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 GRHPRQ9UBQ7 328 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 DNAJB9Q9UBS3 223 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 APCP25054 2843 aa13.58□□□□□ -0.24
CLN6-211ENST00000635754 HRNRQ86YZ3 2850 aaPredicted RBP13.57□□□□□ -0.24
CLN6-211ENST00000635754 DEFB108AA8MXU0 73 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 DEAF1O75398 565 aaPredicted RBP13.57□□□□□ -0.24
CLN6-211ENST00000635754 TRMUO75648 421 aaKnown RBP13.57□□□□□ -0.24
CLN6-211ENST00000635754 HRGP04196 525 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 NR1H2P55055 460 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 UBE2NP61088 152 aaKnown RBP13.57□□□□□ -0.24
CLN6-211ENST00000635754 RUNX1T1Q06455 604 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 CD47Q08722 323 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 TBRG1Q3YBR2 411 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 HIKESHIQ53FT3 197 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 ZNF770Q6IQ21 691 aaPredicted RBP13.57□□□□□ -0.24
CLN6-211ENST00000635754 THSD4Q6ZMP0 1018 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 SYT14Q8NB59 555 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 AQP11Q8NBQ7 271 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 OR10G2Q8NGC3 310 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 ZNF519Q8TB69 540 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 GIPC3Q8TF64 312 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 ZNF837Q96EG3 531 aaPredicted RBP13.57□□□□□ -0.24
CLN6-211ENST00000635754 ZNF570Q96NI8 536 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 RAB3IPQ96QF0 476 aaPredicted RBP13.57□□□□□ -0.24
CLN6-211ENST00000635754 KCNK17Q96T54 332 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 MRPL13Q9BYD1 178 aaKnown RBP13.57□□□□□ -0.24
CLN6-211ENST00000635754 OR52D1Q9H346 318 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 OBP2BQ9NPH6 170 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 IL20RAQ9UHF4 553 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 MGAT4BQ9UQ53 548 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 POFUT2Q9Y2G5 429 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 ADAM18Q9Y3Q7 739 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 MAGED1Q9Y5V3 778 aaPredicted RBP13.57□□□□□ -0.24
CLN6-211ENST00000635754 SLC25A15Q9Y619 301 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 FBN2P35556 2912 aa13.57□□□□□ -0.24
CLN6-211ENST00000635754 A0A096LPE4 126 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.56□□□□□ -0.24
CLN6-211ENST00000635754 A0A1W2PPZ6 126 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 A0A1W2PR80 420 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 ARRDC5A6NEK1 342 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 XKRYO14609 159 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 SIAH2O43255 324 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 TIPRLO75663 272 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 WNT11O96014 354 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 GASTP01350 101 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 QDPRP09417 244 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 GSTM3P21266 225 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 SDHAP31040 664 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 SLC6A6P31641 620 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 RPS6KA3P51812 740 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 IST1P53990 364 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 FXYD6P3P58550 94 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 GABPB1Q06547 395 aaPredicted RBP13.56□□□□□ -0.24
CLN6-211ENST00000635754 HIST3H3Q16695 136 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 RFX4Q33E94 735 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 GPR139Q6DWJ6 353 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 RPL13AP3Q6NVV1 102 aa13.56□□□□□ -0.24
CLN6-211ENST00000635754 SEZ6L2Q6UXD5 910 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms