RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 CX3CR1P49238 355 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 CYP2J2P51589 502 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 WDR5P61964 334 aaKnown RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 RPL19P84098 196 aaKnown RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 DLG1Q12959 904 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 GAGE2BQ13066 116 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 GAGE2EQ4V326 116 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 FAM102AQ5T9C2 384 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 WDR25Q64LD2 544 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 RTL6Q6ICC9 239 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 GAGE2AQ6NT46 116 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 NIPAL1Q6NVV3 410 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 CWC27Q6UX04 472 aaKnown RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 TMEM184AQ6ZMB5 413 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 SLC29A4Q7RTT9 530 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 MAVSQ7Z434 540 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 KIR2DL5AQ8N109 375 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 LRRC18Q8N456 261 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 OR9Q2Q8NGE9 314 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 OR10X1Q8NGY0 326 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 OR5AK3PQ8NH89 298 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 KIR2DL5BQ8NHK3 375 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 UPRTQ96BW1 309 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 FLYWCH2Q96CP2 140 aaKnown RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 TLCD1Q96CP7 247 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 GRAMD2BQ96HH9 432 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 TEPSINQ96N21 525 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 PNKPQ96T60 521 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 C12orf57Q99622 126 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 TIMP4Q99727 224 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 SYT3Q9BQG1 590 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 TNFRSF12AQ9NP84 129 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 ISYNA1Q9NPH2 558 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 STARD5Q9NSY2 213 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 TECRQ9NZ01 308 aaKnown RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 GAGE2DQ9UEU5 116 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 YARS2Q9Y2Z4 477 aaKnown RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 RAP2CQ9Y3L5 183 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 ASB4Q9Y574 426 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 FLT4P35916 1363 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 PAPPA2Q9BXP8 1791 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 DICER1Q9UPY3 1922 aaKnown RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 HTTP42858 3142 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 NSG1A0A0A6YYJ2 146 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 C21orf140B9A014 251 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 FTCDNL1E5RQL4 147 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 F5H768 121 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 H3BMH7 237 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 DFFAO00273 331 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 ADAM10O14672 748 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 TDP2O95551 362 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 HPP00738 406 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 VSIG8P0DPA2 414 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 SNHG28P0DPA3 235 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 IRF2P14316 349 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 GNRHRP30968 328 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 RPL13AP40429 203 aaKnown RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 NSG1P42857 185 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 DNASE1L1P49184 302 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 SRP9P49458 86 aaKnown RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 METAP2P50579 478 aaKnown RBP eCLIP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 DAP3P51398 398 aaKnown RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 CAV2P51636 162 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 FUT6P51993 359 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 DLX5P56178 289 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 ESRRGP62508 458 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 MRPS6P82932 125 aaKnown RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 ACVR1Q04771 509 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 MYBPHQ13203 477 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 PKP1Q13835 747 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 PTGR1Q14914 329 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 ISXQ2M1V0 245 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 SNAI3Q3KNW1 292 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 CD300EQ496F6 205 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 KLHL12Q53G59 568 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 PDZD11Q5EBL8 140 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 ACTL10Q5JWF8 245 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 DMKNQ6E0U4 476 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 SLC25A47Q6Q0C1 308 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 DPY19L2P2Q6ZN68 376 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 NLRX1Q86UT6 975 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 ZNF444Q8N0Y2 327 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 SLC39A11Q8N1S5 342 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 DNAJC22Q8N4W6 341 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 CPSF7Q8N684 471 aaKnown RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 CLDN22Q8N7P3 220 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 TMEM99Q8N816 258 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 HSD17B11Q8NBQ5 300 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 OR1M1Q8NGA1 313 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 ABHD4Q8TB40 342 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 ADAMTS17Q8TE56 1095 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 R3HDM4Q96D70 268 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 MRPL48Q96GC5 212 aaKnown RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 ZNF285Q96NJ3 590 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 ZSWIM1Q9BR11 485 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 C2orf88Q9BSF0 95 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 TMED9Q9BVK6 235 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 MFSD1Q9H3U5 465 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 POPDC2Q9HBU9 364 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms