RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 TRIB1Q96RU8 372 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 ZNF436Q9C0F3 470 aaPredicted RBP10.85□□□□□ -0.67
SHPRH-211ENST00000629427 COPS3Q9UNS2 423 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 POLR2AP24928 1970 aaKnown RBP10.84□□□□□ -0.67
SHPRH-211ENST00000629427 AQP7O14520 342 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 RGS11O94810 467 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 OR10J4P0C629 311 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 ZNF93P35789 620 aaPredicted RBP10.84□□□□□ -0.67
SHPRH-211ENST00000629427 DLX5P56178 289 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 RBMS2Q15434 407 aaKnown RBP10.84□□□□□ -0.67
SHPRH-211ENST00000629427 CST9Q5W186 159 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 ALKAL1Q6UXT8 129 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 OR1N1Q8NGS0 311 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 SLC35A4Q96G79 324 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 HES7Q9BYE0 225 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 TRPM6Q9BX84 2022 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 CACNG3O60359 315 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 F11P03951 625 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 NUDT7P0C024 238 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 SSTR2P30874 369 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 RAB13P51153 203 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 SLC22A25Q6T423 547 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.84□□□□□ -0.67
SHPRH-211ENST00000629427 OR10X1Q8NGY0 326 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 PIGTQ969N2 578 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 LAMB1P07942 1786 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 MEIOCA2RUB1 952 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 LGALS8O00214 317 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 DPY19L2P2Q6ZN68 376 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 CREB3L2Q70SY1 520 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 OR6V1Q8N148 313 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 FAM213BQ8TBF2 198 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 A0A0B4J2A0 478 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 AKR7A3O95154 331 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 UBBP0CG47 229 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 ADPRHP54922 357 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 RPS27AP62979 156 aaKnown RBP10.84□□□□□ -0.67
SHPRH-211ENST00000629427 UBA52P62987 128 aaKnown RBP10.84□□□□□ -0.67
SHPRH-211ENST00000629427 TLE1Q04724 770 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 PHLDA2Q53GA4 152 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 DCXRQ7Z4W1 244 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 SYT9Q86SS6 491 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 SLC35G3Q8N808 338 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 ARRDC2Q8TBH0 407 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 ZNF75AQ96N20 296 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 KCNJ15Q99712 375 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 NRSN2Q9GZP1 204 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 TCEAL2Q9H3H9 227 aaPredicted RBP10.84□□□□□ -0.67
SHPRH-211ENST00000629427 SHPKQ9UHJ6 478 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 EMCNQ9ULC0 261 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 RP1P56715 2156 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 NRG2O14511 850 aaPredicted RBP10.84□□□□□ -0.67
SHPRH-211ENST00000629427 TLE4Q04727 773 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 PGBD5Q8N414 524 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 SLC22A24Q8N4F4 322 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 LKAAEAR1Q8TD35 194 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 RASD2Q96D21 266 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 MS4A8Q9BY19 250 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 FADS1O60427 444 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 BCL6P41182 706 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 SORDQ00796 357 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 GLYR1Q49A26 553 aaPredicted RBP10.84□□□□□ -0.67
SHPRH-211ENST00000629427 ZNF454Q8N9F8 522 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 GHSRQ92847 366 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 TMEM106AQ96A25 262 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 KIAA1456Q9P272 454 aa10.84□□□□□ -0.67
SHPRH-211ENST00000629427 MAST2Q6P0Q8 1798 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 AIPO00170 330 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 CRYZL1O95825 349 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 TGM6O95932 706 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 HOXD11P31277 338 aaPredicted RBP10.83□□□□□ -0.68
SHPRH-211ENST00000629427 GRB2P62993 217 aaKnown RBP10.83□□□□□ -0.68
SHPRH-211ENST00000629427 SLC35A2P78381 396 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 EBPQ15125 230 aaKnown RBP10.83□□□□□ -0.68
SHPRH-211ENST00000629427 C11orf40Q8WZ69 217 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 SEC22AQ96IW7 307 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 NRIP3Q9NQ35 241 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 SCN2AQ99250 2005 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 POM121CA8CG34 1229 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 ZBTB42B2RXF5 422 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 SLC35E2P0CK97 266 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 HLA-DOBP13765 273 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 GGTA1PQ4G0N0 100 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 ZNF439Q8NDP4 499 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 ZFP90Q8TF47 636 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 HPSE2Q8WWQ2 592 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 ZNF582Q96NG8 517 aaPredicted RBP10.83□□□□□ -0.68
SHPRH-211ENST00000629427 FOXQ1Q9C009 403 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 OPA3Q9H6K4 179 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 MARCH5Q9NX47 278 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 C4orf47A7E2U8 309 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 K7ESM1 405 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 CTNSO60931 367 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 FOSL1P15407 271 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 TNFSF8P32971 234 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 NKAIN1Q4KMZ8 207 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 PARP16Q8N5Y8 322 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 OR10J5Q8NHC4 309 aa10.83□□□□□ -0.68
SHPRH-211ENST00000629427 ZMAT3Q9HA38 289 aaKnown RBP10.83□□□□□ -0.68
SHPRH-211ENST00000629427 HEYLQ9NQ87 328 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms