RNA–Protein interactions for RNA: ENST00000625063.3

ATRX-219, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-219ENST00000625063 CMAHPQ9Y471 501 aa4.69□□□□□ -1.66
ATRX-219ENST00000625063 SOX21Q9Y651 276 aaPredicted RBP4.69□□□□□ -1.66
ATRX-219ENST00000625063 IGHV3OR16-10A0A075B7F0 116 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 MDFIC2A0A1B0GVS7 189 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 C5orf63A6NC05 138 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 AQP12BA6NM10 295 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 ZNF716A6NP11 495 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 M0R233 179 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 SULT2B1O00204 365 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 CLIC1O00299 241 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 UPK1AO00322 258 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 DHHO43323 396 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 SYNGR3O43761 229 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 UGDHO60701 494 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 PTP4A3O75365 173 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 RP2O75695 350 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 NDUFA7O95182 113 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 WISP3O95389 354 aaPredicted RBP4.68□□□□□ -1.66
ATRX-219ENST00000625063 H6PDO95479 791 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 MBD3O95983 291 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 IGHV2-5P01817 119 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 FGGP02679 453 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 IL3P08700 152 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 STMN1P16949 149 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 BTF3P20290 206 aaKnown RBP4.68□□□□□ -1.66
ATRX-219ENST00000625063 TIA1P31483 386 aaKnown RBP eCLIP4.68□□□□□ -1.66
ATRX-219ENST00000625063 ARL1P40616 181 aaPredicted RBP4.68□□□□□ -1.66
ATRX-219ENST00000625063 ALDH3B1P43353 468 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 LINC00205P59089 165 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 UBE2NP61088 152 aaKnown RBP4.68□□□□□ -1.66
ATRX-219ENST00000625063 TRA2BP62995 288 aaKnown RBP4.68□□□□□ -1.66
ATRX-219ENST00000625063 TUBA1BP68363 451 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 POU3F1Q03052 451 aaPredicted RBP4.68□□□□□ -1.66
ATRX-219ENST00000625063 ZNF117Q03924 483 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 MFSD13AQ14CX5 517 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 RASA2Q15283 850 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 CD226Q15762 336 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 TSTQ16762 297 aaKnown RBP4.68□□□□□ -1.66
ATRX-219ENST00000625063 SGO1Q5FBB7 561 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 ARMC4Q5T2S8 1044 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 C10orf25Q5T742 122 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 RNASEH2BQ5TBB1 312 aaKnown RBP4.68□□□□□ -1.66
ATRX-219ENST00000625063 TSPO2Q5TGU0 170 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 ABLIM2Q6H8Q1 611 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 TMEM107Q6UX40 140 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 TUBA1AQ71U36 451 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 GOLGA7Q7Z5G4 137 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 EPHX4Q8IUS5 362 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 SAMD14Q8IZD0 417 aaPredicted RBP4.68□□□□□ -1.66
ATRX-219ENST00000625063 L3MBTL4Q8NA19 623 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 STAG3L4Q8TBR4 150 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 GPR151Q8TDV0 419 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 UBTD2Q8WUN7 234 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 KTI12Q96EK9 354 aaPredicted RBP4.68□□□□□ -1.66
ATRX-219ENST00000625063 DNAJA3Q96EY1 480 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 HIST1H2AAQ96QV6 131 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 SIGLEC11Q96RL6 698 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 SLC30A2Q9BRI3 323 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 NAT9Q9BTE0 207 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 LMF2Q9BU23 707 aaKnown RBP4.68□□□□□ -1.66
ATRX-219ENST00000625063 MRPL37Q9BZE1 423 aaKnown RBP4.68□□□□□ -1.66
ATRX-219ENST00000625063 PAIP1Q9H074 479 aaKnown RBP4.68□□□□□ -1.66
ATRX-219ENST00000625063 TRIM36Q9NQ86 728 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 SLC35C2Q9NQQ7 365 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 NECAP2Q9NVZ3 263 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 SLC12A4Q9UP95 1085 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 ACOT9Q9Y305 439 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 AUP1Q9Y679 476 aa4.68□□□□□ -1.66
ATRX-219ENST00000625063 AQP7P3A6NL99 342 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 NR5A2O00482 541 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 ERLIN1O75477 346 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 CLPXO76031 633 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 TGDSO95455 350 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 NGFRP08138 427 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 TFPIP10646 304 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 P2RX1P51575 399 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 NCBP2P52298 156 aaKnown RBP eCLIP4.67□□□□□ -1.66
ATRX-219ENST00000625063 CSNK2A1P68400 391 aaPredicted RBP4.67□□□□□ -1.66
ATRX-219ENST00000625063 MRPS11P82912 194 aaKnown RBP4.67□□□□□ -1.66
ATRX-219ENST00000625063 ARF1P84077 181 aaKnown RBP4.67□□□□□ -1.66
ATRX-219ENST00000625063 CFHR3Q02985 330 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 IFT88Q13099 833 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 SNTB2Q13425 540 aaKnown RBP4.67□□□□□ -1.66
ATRX-219ENST00000625063 GTF2H2Q13888 395 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 MAD2L1BPQ15013 274 aaPredicted RBP4.67□□□□□ -1.66
ATRX-219ENST00000625063 TBRG1Q3YBR2 411 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 DEFB121Q5J5C9 76 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 FRG2Q64ET8 278 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 KRT80Q6KB66 452 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 CAVIN1Q6NZI2 390 aaKnown RBP4.67□□□□□ -1.66
ATRX-219ENST00000625063 GTF2H2CQ6P1K8 395 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 C3orf33Q6P1S2 294 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 TTC27Q6P3X3 843 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 CBLN3Q6UW01 205 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 TMPPEQ6ZT21 453 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 R3HCC1LQ7Z5L2 792 aaKnown RBP4.67□□□□□ -1.66
ATRX-219ENST00000625063 C1orf52Q8N6N3 182 aaKnown RBP4.67□□□□□ -1.66
ATRX-219ENST00000625063 DEFB108BQ8NET1 73 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 RFWD2Q8NHY2 731 aa4.67□□□□□ -1.66
ATRX-219ENST00000625063 LINC01006Q8NI28 216 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms