RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 NSA2O95478 260 aaKnown RBP11.74□□□□□ -0.53
MSH6-215ENST00000622629 NR2C1P13056 603 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 AMY2BP19961 511 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 GLYATL3Q5SZD4 288 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 LRRC69Q6ZNQ3 347 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 SYS1Q8N2H4 156 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 DEFB123Q8N688 67 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 GALNT6Q8NCL4 622 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 GALNT11Q8NCW6 608 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 PMM1Q92871 262 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 CDCP1Q9H5V8 836 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 KLK11Q9UBX7 282 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 CGGBP1Q9UFW8 167 aaPredicted RBP11.74□□□□□ -0.53
MSH6-215ENST00000622629 TRAV36DV7A0A075B6V5 113 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 IFITM5A6NNB3 132 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 ERCC1P07992 297 aaPredicted RBP11.74□□□□□ -0.53
MSH6-215ENST00000622629 HOXB9P17482 250 aaPredicted RBP11.74□□□□□ -0.53
MSH6-215ENST00000622629 CEBPGP53567 150 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 HSD11B2P80365 405 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 GLYR1Q49A26 553 aaPredicted RBP11.74□□□□□ -0.53
MSH6-215ENST00000622629 TMEM244Q5VVB8 128 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 Q7L0L9 218 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 BPIFB2Q8N4F0 458 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 OR13C9Q8NGT0 318 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 ELP5Q8TE02 316 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 RBM24Q9BX46 236 aaKnown RBP11.74□□□□□ -0.53
MSH6-215ENST00000622629 B3GAT2Q9NPZ5 323 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 TDRD6O60522 2096 aaKnown RBP11.73□□□□□ -0.53
MSH6-215ENST00000622629 WRBO00258 174 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 TPPPO94811 219 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 NKX2-2O95096 273 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 CDK2P24941 298 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 PEBP1P30086 187 aaKnown RBP11.73□□□□□ -0.53
MSH6-215ENST00000622629 LIMS1P48059 325 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 RAP2BP61225 183 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 HTR4Q13639 388 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 OPCMLQ14982 345 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 FCRL6Q6DN72 434 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 COX15Q7KZN9 410 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 OR7G1Q8NGA0 311 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 PTP4A1Q93096 173 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 ST6GAL2Q96JF0 529 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 VSX1Q9NZR4 365 aaPredicted RBP11.73□□□□□ -0.53
MSH6-215ENST00000622629 FBXL2Q9UKC9 423 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 ACAD8Q9UKU7 415 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 TRBV11-1A0A0K0K1C0 115 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 RFX2P48378 723 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 DAP3P51398 398 aaKnown RBP11.73□□□□□ -0.53
MSH6-215ENST00000622629 DCAF7P61962 342 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 GPLD1P80108 840 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 RBMS2Q15434 407 aaKnown RBP11.73□□□□□ -0.53
MSH6-215ENST00000622629 FAM189A2Q15884 450 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 PRICKLE4Q2TBC4 344 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 CD276Q5ZPR3 534 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 TMEM92Q6UXU6 159 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 OVCH1Q7RTY7 1134 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 LSRQ86X29 649 aaPredicted RBP11.73□□□□□ -0.53
MSH6-215ENST00000622629 SLC22A8Q8TCC7 542 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 PHYHIPQ92561 330 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 ZNF764Q96H86 408 aaPredicted RBP11.73□□□□□ -0.53
MSH6-215ENST00000622629 SCGB3A2Q96PL1 93 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 ABHD1Q96SE0 405 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 ZNF346Q9UL40 294 aaKnown RBP11.73□□□□□ -0.53
MSH6-215ENST00000622629 MEMO1Q9Y316 297 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 BLACEA4D250 179 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 A6NIZ1 184 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 K7EQS6 105 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 IFNA21P01568 189 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 SDHAP31040 664 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 CBX5P45973 191 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 RAP1BP61224 184 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 RAP1AP62834 184 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 SORDQ00796 357 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 HYAL1Q12794 435 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 AIMP2Q13155 320 aaKnown RBP11.73□□□□□ -0.53
MSH6-215ENST00000622629 SLC22A6Q4U2R8 563 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 HEPHL1Q6MZM0 1159 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 IDO2Q6ZQW0 420 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 ABI3BPQ7Z7G0 1075 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 FAM3DQ96BQ1 224 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 UPRTQ96BW1 309 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 SEC22AQ96IW7 307 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 SLC41A2Q96JW4 573 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 ZNF578Q96N58 590 aaPredicted RBP11.73□□□□□ -0.53
MSH6-215ENST00000622629 NKX3-1Q99801 234 aaPredicted RBP11.73□□□□□ -0.53
MSH6-215ENST00000622629 EMC6Q9BV81 110 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 SEMA4CQ9C0C4 833 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 ENKD1Q9H0I2 346 aa11.73□□□□□ -0.53
MSH6-215ENST00000622629 M0QYG6 137 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 PLA2G10O15496 165 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 ALX3O95076 343 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 CD53P19397 219 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 UBE2MP61081 183 aaKnown RBP11.72□□□□□ -0.53
MSH6-215ENST00000622629 TFF2Q03403 129 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 FUT5Q11128 374 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 C12orf45Q8N5I9 185 aaPredicted RBP11.72□□□□□ -0.53
MSH6-215ENST00000622629 HLA-CQ95604 372 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 ZNF775Q96BV0 537 aaPredicted RBP11.72□□□□□ -0.53
MSH6-215ENST00000622629 POMT2Q9UKY4 750 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 C14orf166Q9Y224 244 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms