RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 IFFO1Q0D2I5 559 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 ALX1Q15699 326 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 SGCAQ16586 387 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 GGTA1PQ4G0N0 100 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 PTPN20Q4JDL3 420 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 C5orf47Q569G3 176 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 PAN3Q58A45 887 aaKnown RBP2.93□□□□□ -1.94
BRCA1-229ENST00000621897 ZNF691Q5VV52 312 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 SLX4IPQ5VYV7 408 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 THOC7Q6I9Y2 204 aaKnown RBP2.93□□□□□ -1.94
BRCA1-229ENST00000621897 OR52W1Q6IF63 320 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 CDC42EP5Q6NZY7 148 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 ULK3Q6PHR2 472 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 LRRC74BQ6ZQY2 392 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 ARHGAP18Q8N392 663 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 OR4D6Q8NGJ1 314 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 NUBPLQ8TB37 319 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 TEX47Q8TBZ9 253 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 SLC35B4Q969S0 331 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 FAM131CQ96AQ9 280 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 FAF2Q96CS3 445 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 SMIM10Q96HG1 83 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 CPB2Q96IY4 423 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 JSRP1Q96MG2 331 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-229ENST00000621897 CSPG4P5Q96PW8 444 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 SLC38A2Q96QD8 506 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 IL4I1Q96RQ9 567 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 NAPGQ99747 312 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-229ENST00000621897 SH3GL3Q99963 347 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 C7orf50Q9BRJ6 194 aaKnown RBP2.93□□□□□ -1.94
BRCA1-229ENST00000621897 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 Q9HAA7 133 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 TIGARQ9NQ88 270 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 OR2S2Q9NQN1 319 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 IMPAD1Q9NX62 359 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 RAB23Q9ULC3 237 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 NPIPA1Q9UND3 350 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 LRRC42Q9Y546 428 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 KPTNQ9Y664 436 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 FHAD1B1AJZ9 1412 aa2.93□□□□□ -1.94
BRCA1-229ENST00000621897 JCADQ9P266 1359 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 GOLGA6L4A6NEF3 574 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 FABP12A6NFH5 140 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 SMIM23A6NLE4 172 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 ZFP92A6NM28 416 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 PRAMEF26H0Y7S4 382 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 KLRC4-KLRK1H3BQV0 150 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 OR7A17O14581 309 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 RFXANKO14593 260 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 AIM2O14862 343 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 GPX5O75715 221 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 OR2J3O76001 311 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 ETHE1O95571 254 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 ASS1P00966 412 aaKnown RBP2.92□□□□□ -1.94
BRCA1-229ENST00000621897 TSPAN8P19075 237 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 TBXA2RP21731 343 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 BGNP21810 368 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 CFL1P23528 166 aaKnown RBP2.92□□□□□ -1.94
BRCA1-229ENST00000621897 CFHR2P36980 270 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 ACTR1BP42025 376 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 MAGEA2P43356 314 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 KIR3DL2P43630 455 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 MRPL19P49406 292 aaKnown RBP2.92□□□□□ -1.94
BRCA1-229ENST00000621897 STK19P49842 368 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-229ENST00000621897 DUSP3P51452 185 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-229ENST00000621897 GTF2A1P52655 376 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-229ENST00000621897 EFNB2P52799 333 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 ATP1B3P54709 279 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 PSMD4P55036 377 aaKnown RBP2.92□□□□□ -1.94
BRCA1-229ENST00000621897 RIPK4P57078 832 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 ACTBP60709 375 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 RAB10P61026 200 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 ACTA2P62736 377 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 ERVK-25P63136 954 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 ACTG1P63261 375 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 ACTG2P63267 376 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 ACTC1P68032 377 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 ACTA1P68133 377 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 LCN2P80188 198 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 CKAP4Q07065 602 aaKnown RBP2.92□□□□□ -1.94
BRCA1-229ENST00000621897 CYTH1Q15438 398 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 MRPL23Q16540 153 aaKnown RBP2.92□□□□□ -1.94
BRCA1-229ENST00000621897 MICAQ29983 383 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 SEL1L2Q5TEA6 688 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 RTL6Q6ICC9 239 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 IGFL2Q6UWQ7 119 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 CLEC18BQ6UXF7 455 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 C2orf66Q6UXQ4 117 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 TMEM184AQ6ZMB5 413 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 DPY19L2P2Q6ZN68 376 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 UTS2BQ765I0 119 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 RANBP3LQ86VV4 465 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-229ENST00000621897 TRIM69Q86WT6 500 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 MCOLN2Q8IZK6 566 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 Q8N9G6 341 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-229ENST00000621897 TMEM239Q8WW34 195 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 PIH1D2Q8WWB5 315 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 RAD51AP1Q96B01 352 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 CXorf58Q96LI9 332 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 ZNF251Q9BRH9 671 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms