RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 FAM173AQ9BQD7 235 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 ZFP64Q9NPA5 681 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 TXNL4BQ9NX01 149 aaKnown RBP19.22■□□□□ 0.67
SPAST-204ENST00000621856 MED29Q9NX70 200 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 HLA-DQA2P01906 255 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 RFPL3SP0C7P2 107 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 CRABP1P29762 137 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 RAC1P63000 192 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 SRSF6Q13247 344 aaKnown RBP19.22■□□□□ 0.67
SPAST-204ENST00000621856 CDONQ4KMG0 1287 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 TIGD4Q8IY51 512 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 SYS1Q8N2H4 156 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 SYT14Q8NB59 555 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 OR6N2Q8NGY6 317 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 ADAD1Q96M93 576 aaKnown RBP19.22■□□□□ 0.67
SPAST-204ENST00000621856 INTS14Q96SY0 518 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 B3GAT1Q9P2W7 334 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 GNG8Q9UK08 70 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 CNOT1A5YKK6 2376 aaKnown RBP19.22■□□□□ 0.67
SPAST-204ENST00000621856 NCKAP5O14513 1909 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 MED13Q9UHV7 2174 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 FREM3P0C091 2139 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 GJE1A6NN92 205 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 E9PI62 339 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 MAGEB4O15481 346 aaPredicted RBP19.21■□□□□ 0.67
SPAST-204ENST00000621856 SEC14L5O43304 696 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 GPANK1O95872 356 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 P2RY4P51582 365 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 GBX2P52951 348 aaPredicted RBP19.21■□□□□ 0.67
SPAST-204ENST00000621856 BIDP55957 195 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 B3GALT5-AS1P59052 145 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 FABP5Q01469 135 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 GPR50Q13585 617 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 C22orf42Q6IC83 251 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 ARL9Q6T311 187 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 GPAT4Q86UL3 456 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 FAM83FQ8NEG4 500 aaPredicted RBP19.21■□□□□ 0.67
SPAST-204ENST00000621856 OR2M7Q8NG81 312 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 OXGR1Q96P68 337 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 SLIRPQ9GZT3 109 aaKnown RBP19.21■□□□□ 0.67
SPAST-204ENST00000621856 CCDC59Q9P031 241 aaKnown RBP19.21■□□□□ 0.67
SPAST-204ENST00000621856 SIRT4Q9Y6E7 314 aaPredicted RBP19.21■□□□□ 0.67
SPAST-204ENST00000621856 PMF1-BGLAPU3KQ54 211 aa19.21■□□□□ 0.67
SPAST-204ENST00000621856 RIF1Q5UIP0 2472 aaKnown RBP19.21■□□□□ 0.67
SPAST-204ENST00000621856 MED12Q93074 2177 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 AQP7P3A6NL99 342 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 NKX2-8O15522 239 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 CTLA4P16410 223 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 BLVRAP53004 296 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 AGAP7PQ5VUJ5 663 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 DNM1P34Q6PK57 102 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 MCFD2Q8NI22 146 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 KCNE4Q8WWG9 221 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 SLC39A7Q92504 469 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 KLHL15Q96M94 604 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 SFXN2Q96NB2 322 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 FOXN4Q96NZ1 517 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 AGAP4Q96P64 663 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 GSTK1Q9Y2Q3 226 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 IGLV1-36A0A0B4J1U3 117 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 ZNF814B7Z6K7 855 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 HLA-DPB1P04440 258 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 SOX6P35712 828 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 CSNK2A1P68400 391 aaPredicted RBP19.2■□□□□ 0.66
SPAST-204ENST00000621856 FOXO1Q12778 655 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 ZNF239Q16600 458 aaKnown RBP19.2■□□□□ 0.66
SPAST-204ENST00000621856 MOGQ16653 247 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 VASNQ6EMK4 673 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 CDC20BQ86Y33 519 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 KCNK17Q96T54 332 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 EMC6Q9BV81 110 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 HES7Q9BYE0 225 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 WDR76Q9H967 626 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 SLC24A3Q9HC58 644 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 MRPS18CQ9Y3D5 142 aaKnown RBP19.2■□□□□ 0.66
SPAST-204ENST00000621856 GRIP1Q9Y3R0 1128 aa19.2■□□□□ 0.66
SPAST-204ENST00000621856 ALPK2Q86TB3 2170 aa19.19■□□□□ 0.66
SPAST-204ENST00000621856 TRDV1A0A1B0GX56 115 aa19.19■□□□□ 0.66
SPAST-204ENST00000621856 SLC3A1Q07837 685 aa19.19■□□□□ 0.66
SPAST-204ENST00000621856 WIPI1Q5MNZ9 446 aaPredicted RBP19.19■□□□□ 0.66
SPAST-204ENST00000621856 CD200R1LQ6Q8B3 271 aa19.19■□□□□ 0.66
SPAST-204ENST00000621856 RPTNQ6XPR3 784 aa19.19■□□□□ 0.66
SPAST-204ENST00000621856 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.19■□□□□ 0.66
SPAST-204ENST00000621856 KCTD7Q96MP8 289 aa19.19■□□□□ 0.66
SPAST-204ENST00000621856 MNTQ99583 582 aa19.19■□□□□ 0.66
SPAST-204ENST00000621856 COQ7Q99807 217 aa19.19■□□□□ 0.66
SPAST-204ENST00000621856 NAA11Q9BSU3 229 aaPredicted RBP19.19■□□□□ 0.66
SPAST-204ENST00000621856 HDHD5Q9BXW7 423 aa19.19■□□□□ 0.66
SPAST-204ENST00000621856 OR2B2Q9GZK3 357 aa19.19■□□□□ 0.66
SPAST-204ENST00000621856 TSPAN10Q9H1Z9 355 aaPredicted RBP19.19■□□□□ 0.66
SPAST-204ENST00000621856 MARCH7Q9H992 704 aa19.19■□□□□ 0.66
SPAST-204ENST00000621856 B4GALT7Q9UBV7 327 aa19.19■□□□□ 0.66
SPAST-204ENST00000621856 LAMP5Q9UJQ1 280 aa19.19■□□□□ 0.66
SPAST-204ENST00000621856 CDV3Q9UKY7 258 aaKnown RBP19.19■□□□□ 0.66
SPAST-204ENST00000621856 RASD1Q9Y272 281 aa19.19■□□□□ 0.66
SPAST-204ENST00000621856 A0A0J9YW62 118 aa19.18■□□□□ 0.66
SPAST-204ENST00000621856 METTL15A6NJ78 407 aa19.18■□□□□ 0.66
SPAST-204ENST00000621856 TNFSF11O14788 317 aa19.18■□□□□ 0.66
SPAST-204ENST00000621856 EIF1BO60739 113 aaKnown RBP19.18■□□□□ 0.66
SPAST-204ENST00000621856 ZNF43P17038 809 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms