RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 C17orf78Q8N4C9 275 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 OR5D16Q8NGK9 328 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 OR5AK3PQ8NH89 298 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 OR5K1Q8NHB7 308 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 ZNF563Q8TA94 476 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 MUL1Q969V5 352 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 ZNF566Q969W8 418 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 PPP1R14BQ96C90 147 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 SLC47A1Q96FL8 570 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 C1orf159Q96HA4 380 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 ARL5BQ96KC2 179 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 OR7D2Q96RA2 312 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 SDF2Q99470 211 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 SH3GL1Q99961 368 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 RBM4BQ9BQ04 359 aaKnown RBP6.83□□□□□ -1.32
CLK1-215ENST00000621181 RBM4Q9BWF3 364 aaKnown RBP6.83□□□□□ -1.32
CLK1-215ENST00000621181 LAT2Q9GZY6 243 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 ATAD3AQ9NVI7 634 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 GPATCH2Q9NW75 528 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 AMDHD2Q9Y303 409 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 ANK2Q01484 3957 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 LRP5LA4QPB2 252 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 M0QX08 132 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 MAGEB3O15480 346 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 SPRY1O43609 319 aaPredicted RBP6.83□□□□□ -1.32
CLK1-215ENST00000621181 STX11O75558 287 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 PMS2P2O95744 297 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 C6orf47O95873 294 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 WNT11O96014 354 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 C1QCP02747 245 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 IL7RP16871 459 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 ITGA2P17301 1181 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 RYKP34925 604 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 SOAT1P35610 550 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 SERPINF1P36955 418 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 APOBEC1P41238 236 aaKnown RBP6.83□□□□□ -1.32
CLK1-215ENST00000621181 CDKN2CP42773 168 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 SLC16A1P53985 500 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 PRPS1P60891 318 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 RPS26P62854 115 aaKnown RBP6.83□□□□□ -1.32
CLK1-215ENST00000621181 EPS8Q12929 822 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 NEDD8Q15843 81 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 MOGQ16653 247 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 SWI5Q1ZZU3 235 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 MST1LQ2TV78 715 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 ZNF691Q5VV52 312 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 EIF3MQ7L2H7 374 aaKnown RBP6.83□□□□□ -1.32
CLK1-215ENST00000621181 MEX3DQ86XN8 651 aaKnown RBP6.83□□□□□ -1.32
CLK1-215ENST00000621181 C8orf59Q8N0T1 100 aaPredicted RBP6.83□□□□□ -1.32
CLK1-215ENST00000621181 WDR31Q8NA23 367 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 C1orf162Q8NEQ5 155 aaPredicted RBP6.83□□□□□ -1.32
CLK1-215ENST00000621181 PSMA8Q8TAA3 256 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 OR5P2Q8WZ92 322 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 POP5Q969H6 163 aaKnown RBP6.83□□□□□ -1.32
CLK1-215ENST00000621181 OR52E6Q96RD3 313 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 DCUN1D5Q9BTE7 237 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 PLA2G12AQ9BZM1 189 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 SLC17A5Q9NRA2 495 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 CTPS2Q9NRF8 586 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 ACER3Q9NUN7 267 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 TBCCD1Q9NVR7 557 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 PARPBPQ9NWS1 579 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 PAK1IP1Q9NWT1 392 aaPredicted RBP6.83□□□□□ -1.32
CLK1-215ENST00000621181 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.83□□□□□ -1.32
CLK1-215ENST00000621181 ATP6V1HQ9UI12 483 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 MKLN1Q9UL63 735 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 HDGFL3Q9Y3E1 203 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 PCDHGB1Q9Y5G3 927 aa6.83□□□□□ -1.32
CLK1-215ENST00000621181 DYSFO75923 2080 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 CENPVL1A0A0U1RR11 272 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 DUXAA6NLW8 204 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 WIPF1O43516 503 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 FCMRO60667 390 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 AK1P00568 194 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 CST1P01037 141 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 ERCC1P07992 297 aaPredicted RBP6.82□□□□□ -1.32
CLK1-215ENST00000621181 CCNA2P20248 432 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 FKBP2P26885 142 aaKnown RBP6.82□□□□□ -1.32
CLK1-215ENST00000621181 CFPP27918 469 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 MAPK1P28482 360 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 BMXP51813 675 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 OR2B6P58173 313 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 IL18R1Q13478 541 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 AQP6Q13520 282 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 ZNF141Q15928 474 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 SHQ1Q6PI26 577 aaKnown RBP6.82□□□□□ -1.32
CLK1-215ENST00000621181 C16orf62Q7Z3J2 963 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 GRINAQ7Z429 371 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 CYP4Z1Q86W10 505 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 CLEC4FQ8N1N0 589 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 RNF217Q8TC41 542 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 SFXN5Q8TD22 340 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 BORCS5Q969J3 196 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 MOAP1Q96BY2 351 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 PYURFQ96I23 114 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 SOX7Q9BT81 388 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 OR11A1Q9GZK7 315 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 ADAM19Q9H013 955 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 SLC7A10Q9NS82 523 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 CA10Q9NS85 328 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms