RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 HNRNPKP61978 463 aaKnown RBP eCLIP6.37□□□□□ -1.392e-6■□□□□ 10.5
NEDD9-216ENST00000620854 MC2RQ01718 297 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 RASGEF1BQ0VAM2 473 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 AIMP2Q13155 320 aaKnown RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 GK2Q14410 553 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 SMAD2Q15796 467 aaKnown RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 ABHD17CQ6PCB6 329 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 MUC20Q8N307 709 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 TMEM185AQ8NFB2 350 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 OR51S1Q8NGJ8 323 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 NPAS1Q99742 590 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 PRSS27Q9BQR3 290 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 PRDM7Q9NQW5 492 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 MED17Q9NVC6 651 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 C2orf42Q9NWW7 574 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 ABRACLQ9P1F3 81 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 KIF25Q9UIL4 384 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 ING1Q9UK53 422 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 NPIPA1Q9UND3 350 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 DCDC2BA2VCK2 349 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 TVP23AA6NH52 213 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 IFITM5A6NNB3 132 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 TLX3O43711 291 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 PAPLNO95428 1278 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 LDOC1O95751 146 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 OR8G3PP0DMU2 310 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 GABRA1P14867 456 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 PRKXP51817 358 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 ART1P52961 327 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 RAP2BP61225 183 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 DYRK1AQ13627 763 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 CDK5R1Q15078 307 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 IRF4Q15306 451 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 TSC22D1Q15714 1073 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 LEG1Q6P5S2 330 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 PXKQ7Z7A4 578 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 OR6N1Q8NGY5 312 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 SCARB1Q8WTV0 552 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 SLC25A38Q96DW6 304 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 CPNE2Q96FN4 548 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 WBP1Q96G27 269 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 SLC25A44Q96H78 314 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 PTDSS2Q9BVG9 487 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 SYT4Q9H2B2 425 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 NRIP3Q9NQ35 241 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 NPDC1Q9NQX5 325 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-216ENST00000620854 PRTFDC1Q9NRG1 225 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 EPHA6Q9UF33 1036 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 SIGLEC7Q9Y286 467 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 HEATR5AQ86XA9 2040 aa6.37□□□□□ -1.39
NEDD9-216ENST00000620854 D6RAR5 112 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 BET1O15155 118 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 CDC40O60508 579 aaKnown RBP eCLIP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ZFPL1O95159 310 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 CSTBP04080 98 aaKnown RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 AMY2AP04746 511 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 GP1BBP13224 206 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 S100GP29377 79 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF136P52737 540 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 CTXN1P60606 82 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ACTC1P68032 377 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ACTA1P68133 377 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 REEP5Q00765 189 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 UBE2NLQ5JXB2 153 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 SLC48A1Q6P1K1 146 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 FAM199XQ6PEV8 388 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 Q6ZSR6 202 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF765Q7L2R6 523 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ZAR1Q86SH2 424 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 TMEM17Q86X19 198 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF584Q8IVC4 421 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 OR1S1Q8NH92 325 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ZPLD1Q8TCW7 415 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 CD300LFQ8TDQ1 290 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 C15orf40Q8WUR7 153 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF75AQ96N20 296 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 CNN2Q99439 309 aaKnown RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 SDF2Q99470 211 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 POTEKPQ9BYX7 375 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 LDAHQ9H6V9 325 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 TMEM74BQ9NUR3 256 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 KLRF1Q9NZS2 232 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 V9GY05 133 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 SPTBN5Q9NRC6 3674 aaKnown RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 C2orf74A8MZ97 194 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 H7C1C5 153 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 GPR31O00270 319 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 SYT5O00445 386 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 TGM6O95932 706 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 CPMP14384 443 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 AKR1C4P17516 323 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 CCNOP22674 350 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 VASPP50552 380 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 LCN6P62502 163 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 SPIN3Q5JUX0 258 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 NKAPLQ5M9Q1 402 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ARHGAP40Q5TG30 622 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 B3GNTL1Q67FW5 361 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF660Q6AZW8 331 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms