RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ACSM5Q6NUN0 579 aa12.03□□□□□ -0.48
NEK3-210ENST00000620675 UBE2J2Q8N2K1 259 aa12.03□□□□□ -0.48
NEK3-210ENST00000620675 ZNF808Q8N4W9 903 aaPredicted RBP12.03□□□□□ -0.48
NEK3-210ENST00000620675 ERMAPQ96PL5 475 aaPredicted RBP12.03□□□□□ -0.48
NEK3-210ENST00000620675 RNPEPL1Q9HAU8 725 aa12.03□□□□□ -0.48
NEK3-210ENST00000620675 PAPOLBQ9NRJ5 636 aaKnown RBP12.03□□□□□ -0.48
NEK3-210ENST00000620675 KRT84Q9NSB2 600 aa12.03□□□□□ -0.48
NEK3-210ENST00000620675 FOXD3Q9UJU5 478 aaPredicted RBP12.03□□□□□ -0.48
NEK3-210ENST00000620675 AKAP6Q13023 2319 aa12.03□□□□□ -0.48
NEK3-210ENST00000620675 M0R3G1 203 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 OSMP13725 252 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 GSTM3P21266 225 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 IGFBP5P24593 272 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 CDKN2AP42771 156 aaKnown RBP12.02□□□□□ -0.48
NEK3-210ENST00000620675 COX10Q12887 443 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 ZIK1Q3SY52 487 aaPredicted RBP12.02□□□□□ -0.48
NEK3-210ENST00000620675 ANKDD1AQ495B1 522 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 LRFN4Q6PJG9 635 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 DPY19L2P2Q6ZN68 376 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 C22orf34Q6ZV56 151 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 GABRG1Q8N1C3 465 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 OR6X1Q8NH79 312 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 SSC4DQ8WTU2 575 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 ASB5Q8WWX0 329 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 EME1Q96AY2 570 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 ZNF570Q96NI8 536 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 MRPL13Q9BYD1 178 aaKnown RBP12.02□□□□□ -0.48
NEK3-210ENST00000620675 SLCO5A1Q9H2Y9 848 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 ZNF556Q9HAH1 456 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 NPDC1Q9NQX5 325 aaPredicted RBP12.02□□□□□ -0.48
NEK3-210ENST00000620675 GALNT8Q9NY28 637 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 RCE1Q9Y256 329 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 PLCE1Q9P212 2302 aa12.02□□□□□ -0.48
NEK3-210ENST00000620675 A1L4Q6 167 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 ZNF726A6NNF4 738 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 M0R129 80 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 DLGAP1O14490 977 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 MSTNO14793 375 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 ARHGEF9O43307 516 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 LYZL6O75951 148 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 SEC14L2O76054 403 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 CLDN14O95500 239 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 HIST1H1CP16403 213 aaKnown RBP12.02□□□□□ -0.49
NEK3-210ENST00000620675 IGHV1-2P23083 117 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 SLC6A6P31641 620 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 CCKARP32238 428 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 ZNF362Q5T0B9 420 aaPredicted RBP12.02□□□□□ -0.49
NEK3-210ENST00000620675 FBXW9Q5XUX1 488 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 XKRXQ6PP77 449 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 ZBTB49Q6ZSB9 765 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 C20orf196Q8IYI0 205 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 GALNT4Q8N4A0 578 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 ARIH2OSQ8N7S6 290 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 OR4K13Q8NH42 304 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 SLC25A44Q96H78 314 aaPredicted RBP12.02□□□□□ -0.49
NEK3-210ENST00000620675 KCNK17Q96T54 332 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 PARPBPQ9NWS1 579 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 GRHPRQ9UBQ7 328 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 POFUT2Q9Y2G5 429 aa12.02□□□□□ -0.49
NEK3-210ENST00000620675 ITGA5P08648 1049 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 ACADSP16219 412 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 CDH2P19022 906 aaPredicted RBP12.01□□□□□ -0.49
NEK3-210ENST00000620675 SDHAP31040 664 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 DAP3P51398 398 aaKnown RBP12.01□□□□□ -0.49
NEK3-210ENST00000620675 KRR1Q13601 381 aaKnown RBP12.01□□□□□ -0.49
NEK3-210ENST00000620675 GINS1Q14691 196 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 OTPQ5XKR4 325 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 CXorf67Q86X51 503 aaPredicted RBP12.01□□□□□ -0.49
NEK3-210ENST00000620675 CYB561A3Q8NBI2 242 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 ZNF566Q969W8 418 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 NMD3Q96D46 503 aaKnown RBP12.01□□□□□ -0.49
NEK3-210ENST00000620675 TSSK2Q96PF2 358 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 RBM4BQ9BQ04 359 aaKnown RBP12.01□□□□□ -0.49
NEK3-210ENST00000620675 TACO1Q9BSH4 297 aaKnown RBP12.01□□□□□ -0.49
NEK3-210ENST00000620675 C9orf16Q9BUW7 83 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 RBM4Q9BWF3 364 aaKnown RBP12.01□□□□□ -0.49
NEK3-210ENST00000620675 RBM24Q9BX46 236 aaKnown RBP12.01□□□□□ -0.49
NEK3-210ENST00000620675 FN3KQ9H479 309 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 MALT1Q9UDY8 824 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 NPIPB13A6NJU9 1138 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 NPIPB4C9JG80 1138 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 DCTN6O00399 190 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 SLC43A1O75387 559 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 ATP6V1G2O95670 118 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 SNAP29O95721 258 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 CLDN1O95832 211 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 GIPRP48546 466 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 ALDH3A2P51648 485 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 CRISP1P54107 249 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 SLC34A1Q06495 639 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 ETFDHQ16134 617 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 SLC25A35Q3KQZ1 300 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 STAC2Q6ZMT1 411 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 Q6ZT83 130 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 PARP8Q8N3A8 854 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 SDR9C7Q8NEX9 313 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 NOXO1Q8NFA2 376 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 OR52L1Q8NGH7 329 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 OR6N1Q8NGY5 312 aa12.01□□□□□ -0.49
NEK3-210ENST00000620675 TEX47Q8TBZ9 253 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms