RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 IDH2P48735 452 aaKnown RBP3.83□□□□□ -1.8
SNCA-213ENST00000618500 IDH3AP50213 366 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 ZNF81P51508 661 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 PRKAG1P54619 331 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 BTG1P62324 171 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 POU4F2Q12837 409 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 MAD2L1BPQ15013 274 aaPredicted RBP3.83□□□□□ -1.8
SNCA-213ENST00000618500 MAPK14Q16539 360 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 TBC1D28Q2M2D7 210 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 CEACAM16Q2WEN9 425 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 DEFB112Q30KQ8 113 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 ESCO2Q56NI9 601 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 SPDYAQ5MJ70 313 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 ATAD3BQ5T9A4 648 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 GKAP1Q5VSY0 366 aaPredicted RBP3.83□□□□□ -1.8
SNCA-213ENST00000618500 C9orf135Q5VTT2 229 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 WFDC9Q8NEX5 89 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 OR8J2Q8NGG1 315 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 PRPF18Q99633 342 aaKnown RBP3.83□□□□□ -1.8
SNCA-213ENST00000618500 DPAGT1Q9H3H5 408 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 CRLF2Q9HC73 371 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 MAN2C1Q9NTJ4 1040 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 POFUT2Q9Y2G5 429 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 HEATR1Q9H583 2144 aaKnown RBP3.83□□□□□ -1.8
SNCA-213ENST00000618500 CENPVL1A0A0U1RR11 272 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 NPIPB13A6NJU9 1138 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 NPIPB4C9JG80 1138 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 H0YL77 283 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 AP3D1O14617 1153 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 PHYHO14832 338 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 POLR3GO15318 223 aaPredicted RBP3.83□□□□□ -1.8
SNCA-213ENST00000618500 AKR7A3O95154 331 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 ZFPL1O95159 310 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 IGHV4-38-2P0DP08 117 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 PNMTP11086 282 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 MMP9P14780 707 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 ACAA2P42765 397 aaKnown RBP3.83□□□□□ -1.8
SNCA-213ENST00000618500 CCR4P51679 360 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 CDH13P55290 713 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 OR7A5Q15622 319 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 AVPI1Q5T686 147 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 FAM91A1Q658Y4 838 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 CLEC6AQ6EIG7 209 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 NDUFA11Q86Y39 141 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 Q8N2B8 174 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 OR10S1Q8NGN2 331 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 OR5R1Q8NH85 324 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 PNPT1Q8TCS8 783 aaKnown RBP3.83□□□□□ -1.8
SNCA-213ENST00000618500 TUBGCP3Q96CW5 907 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 SSBP3Q9BWW4 388 aaPredicted RBP3.83□□□□□ -1.8
SNCA-213ENST00000618500 TRIM15Q9C019 465 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 MRPL39Q9NYK5 338 aaKnown RBP3.83□□□□□ -1.8
SNCA-213ENST00000618500 IL19Q9UHD0 177 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 WDR45Q9Y484 360 aa3.83□□□□□ -1.8
SNCA-213ENST00000618500 PLXNB1O43157 2135 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 CDHR4A6H8M9 788 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 ENSAO43768 121 aaKnown RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 PIP5K1CO60331 668 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 RGS9O75916 674 aaPredicted RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 AHSA1O95433 338 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 IGF2P01344 180 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 SNRPAP09012 282 aaKnown RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 UBTFL6P0CB48 400 aaPredicted RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 COX5BP10606 129 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 CXCR1P25024 350 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 EPHA3P29320 983 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 TGFBR2P37173 567 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 UCP2P55851 309 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 TUBA1BP68363 451 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 TUBA4AP68366 448 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 MAD2L1Q13257 205 aaPredicted RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 PMS2P3Q13401 168 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 HIST3H3Q16695 136 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 CCDC153Q494R4 210 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 TMEM225Q6GV28 225 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 Q6ZSV7 163 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 FOXL2NBQ6ZUU3 175 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 TUBA1AQ71U36 451 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 C16orf62Q7Z3J2 963 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 C6orf120Q7Z4R8 191 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 LINC00528Q8N1L1 170 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 SLC35F6Q8N357 371 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 FITM2Q8N6M3 262 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 LSMEM1Q8N8F7 131 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 SLC30A7Q8NEW0 376 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 RFWD2Q8NHY2 731 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 Q8TCH9 128 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 SLC47A1Q96FL8 570 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 MARS2Q96GW9 593 aaKnown RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 PLEKHA8Q96JA3 519 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 EGLN2Q96KS0 407 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 FOXB1Q99853 325 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 SPATA9Q9BWV2 254 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 MTHFD2LQ9H903 347 aaPredicted RBP3.82□□□□□ -1.8
SNCA-213ENST00000618500 SMURF2Q9HAU4 748 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 MID1IP1Q9NPA3 183 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 TRIM36Q9NQ86 728 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 ZDHHC18Q9NUE0 388 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 TMEM106BQ9NUM4 274 aa3.82□□□□□ -1.8
SNCA-213ENST00000618500 MKS1Q9NXB0 559 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms