RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 PPP1R3DO95685 299 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 BMP5P22003 454 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 PEX2P28328 305 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 NOS3P29474 1203 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 ACVR1BP36896 505 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 SELENOPP49908 381 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 MYBPC1Q00872 1141 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 GINS1Q14691 196 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 PTGES3Q15185 160 aaKnown RBP13.97□□□□□ -0.17
MALAT1-213ENST00000618227 PGGHGQ32M88 737 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 THEM4Q5T1C6 240 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 LPCAT4Q643R3 524 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 NCCRP1Q6ZVX7 275 aaPredicted RBP13.97□□□□□ -0.17
MALAT1-213ENST00000618227 IGFN1Q86VF2 1251 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 LIX1LQ8IVB5 337 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 ZNF610Q8N9Z0 462 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 ITLN2Q8WWU7 325 aaPredicted RBP13.97□□□□□ -0.17
MALAT1-213ENST00000618227 NMD3Q96D46 503 aaKnown RBP13.97□□□□□ -0.17
MALAT1-213ENST00000618227 LRRC46Q96FV0 321 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 Q96M85 177 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 USB1Q9BQ65 265 aaKnown RBP13.97□□□□□ -0.17
MALAT1-213ENST00000618227 EMC6Q9BV81 110 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 GLTPQ9NZD2 209 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 VSX1Q9NZR4 365 aaPredicted RBP13.97□□□□□ -0.17
MALAT1-213ENST00000618227 IL20RAQ9UHF4 553 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 KLHL21Q9UJP4 597 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 ADAM18Q9Y3Q7 739 aa13.97□□□□□ -0.17
MALAT1-213ENST00000618227 PRSS37A4D1T9 235 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 MITFO75030 526 aaPredicted RBP13.96□□□□□ -0.17
MALAT1-213ENST00000618227 IFNGP01579 166 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 IGFBP1P08833 259 aaPredicted RBP13.96□□□□□ -0.17
MALAT1-213ENST00000618227 POU1F1P28069 291 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 CSNK1A1P48729 337 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 ASCL1P50553 236 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 ITGADQ13349 1161 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 KRR1Q13601 381 aaKnown RBP13.96□□□□□ -0.17
MALAT1-213ENST00000618227 CLEC12AQ5QGZ9 265 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 ZNF362Q5T0B9 420 aaPredicted RBP13.96□□□□□ -0.17
MALAT1-213ENST00000618227 TSPO2Q5TGU0 170 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 SLX4IPQ5VYV7 408 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 GPR137CQ8N3F9 429 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 FAM26EQ8N5C1 309 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 RELL2Q8NC24 303 aaPredicted RBP13.96□□□□□ -0.17
MALAT1-213ENST00000618227 NOXO1Q8NFA2 376 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 CA5BP1Q8WTZ4 195 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 RBP7Q96R05 134 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 HDHD5Q9BXW7 423 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 GRIP2Q9C0E4 1043 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 OR10A4Q9H209 315 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 KCNJ16Q9NPI9 418 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 CMC2Q9NRP2 79 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 SLC7A10Q9NS82 523 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 ASB6Q9NWX5 421 aa13.96□□□□□ -0.17
MALAT1-213ENST00000618227 SMPD3Q9NY59 655 aaPredicted RBP13.96□□□□□ -0.17
MALAT1-213ENST00000618227 TEX13CA0A0J9YWL9 993 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 ZG16O60844 167 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 CLDN14O95500 239 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 MPGP29372 298 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 SH3BGRP55822 239 aaPredicted RBP13.95□□□□□ -0.18
MALAT1-213ENST00000618227 CLRN1P58418 232 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 TOP3AQ13472 1001 aaPredicted RBP13.95□□□□□ -0.18
MALAT1-213ENST00000618227 CAMK2DQ13557 499 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 MELKQ14680 651 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 LRRC36Q1X8D7 754 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 MESTQ5EB52 335 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 MYO7BQ6PIF6 2116 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 GABRG1Q8N1C3 465 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 OR6N1Q8NGY5 312 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 OR4Q3Q8NH05 313 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 HDAC2Q92769 488 aaKnown RBP13.95□□□□□ -0.18
MALAT1-213ENST00000618227 HRASLS5Q96KN8 279 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 SLC38A2Q96QD8 506 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 DDOQ99489 341 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 C12orf49Q9H741 205 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 UPB1Q9UBR1 384 aa13.95□□□□□ -0.18
MALAT1-213ENST00000618227 NCOA6Q14686 2063 aaPredicted RBP13.95□□□□□ -0.18
MALAT1-213ENST00000618227 HIVEP3Q5T1R4 2406 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 SLC22A23A1A5C7 686 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 RIIAD1A6NNX1 92 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 ZNF587BE7ETH6 402 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 DLGAP1O14490 977 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 SLC16A6O15403 523 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 ARHGEF9O43307 516 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 SMNDC1O75940 238 aaKnown RBP eCLIP13.94□□□□□ -0.18not detected■■■■■ 41.9
MALAT1-213ENST00000618227 KRT33AO76009 404 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 HIST1H1CP16403 213 aaKnown RBP13.94□□□□□ -0.18
MALAT1-213ENST00000618227 PSMB1P20618 241 aaKnown RBP13.94□□□□□ -0.18
MALAT1-213ENST00000618227 COX5AP20674 150 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 CRABP1P29762 137 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 EFNB1P98172 346 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 TGFBR3Q03167 851 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 RUNX1T1Q06455 604 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 NRN1LQ496H8 165 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 C10orf128Q5T292 105 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 C12orf73Q69YU5 71 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 ACSM5Q6NUN0 579 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 LRFN4Q6PJG9 635 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 ZNF474Q6S9Z5 364 aaPredicted RBP13.94□□□□□ -0.18
MALAT1-213ENST00000618227 ZNF627Q7L945 461 aa13.94□□□□□ -0.18
MALAT1-213ENST00000618227 SSX8Q7RTT4 187 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms