RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 GPALPP1Q8IXQ4 340 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 ABHD4Q8TB40 342 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 GHSRQ92847 366 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 ARL5BQ96KC2 179 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 TMEM246Q9BRR3 403 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 KCNN2Q9H2S1 579 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 WDR54Q9H977 334 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 B3GAT2Q9NPZ5 323 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 GRHPRQ9UBQ7 328 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 CELSR3Q9NYQ7 3312 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 ANKUB1A6NFN9 424 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 A8MVM7 634 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 FTCDNL1E5RQL4 147 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 LYRM1O43325 122 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 ZFAND5O76080 213 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 PLGP00747 810 aaPredicted RBP15.78■□□□□ 0.12
CNOT3-209ENST00000617930 GALP22466 123 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 HLA-DMAP28067 261 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 EVX1P49640 407 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 FOXK1P85037 733 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 C17orf67Q0P5P2 114 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 JAZF1Q86VZ6 243 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 LIN37Q96GY3 246 aaPredicted RBP15.78■□□□□ 0.12
CNOT3-209ENST00000617930 ZC3HAV1LQ96H79 300 aaKnown RBP15.78■□□□□ 0.12
CNOT3-209ENST00000617930 SOSTQ9BQB4 213 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 ACOXLQ9NUZ1 547 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 RBFOX1Q9NWB1 397 aaKnown RBP15.78■□□□□ 0.12
CNOT3-209ENST00000617930 SLC6A5Q9Y345 797 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 AHCTF1Q8WYP5 2266 aa15.78■□□□□ 0.12
CNOT3-209ENST00000617930 FAM240BA0A1B0GVZ2 78 aa15.77■□□□□ 0.12
CNOT3-209ENST00000617930 OGG1O15527 345 aa15.77■□□□□ 0.12
CNOT3-209ENST00000617930 DXOO77932 396 aaKnown RBP15.77■□□□□ 0.12
CNOT3-209ENST00000617930 PSMB10P40306 273 aa15.77■□□□□ 0.12
CNOT3-209ENST00000617930 RPS18P62269 152 aaKnown RBP15.77■□□□□ 0.12
CNOT3-209ENST00000617930 RPS11P62280 158 aaKnown RBP eCLIP15.77■□□□□ 0.12
CNOT3-209ENST00000617930 TATDN3Q17R31 274 aa15.77■□□□□ 0.12
CNOT3-209ENST00000617930 FAM69AQ5T7M9 428 aa15.77■□□□□ 0.12
CNOT3-209ENST00000617930 GLCCI1Q86VQ1 547 aa15.77■□□□□ 0.12
CNOT3-209ENST00000617930 TIGD4Q8IY51 512 aa15.77■□□□□ 0.12
CNOT3-209ENST00000617930 KDM8Q8N371 416 aa15.77■□□□□ 0.12
CNOT3-209ENST00000617930 OR5L2Q8NGL0 311 aa15.77■□□□□ 0.12
CNOT3-209ENST00000617930 RASL10BQ96S79 203 aa15.77■□□□□ 0.12
CNOT3-209ENST00000617930 SYT4Q9H2B2 425 aa15.77■□□□□ 0.12
CNOT3-209ENST00000617930 VDAC3Q9Y277 283 aa15.77■□□□□ 0.12
CNOT3-209ENST00000617930 BOLA1Q9Y3E2 137 aa15.77■□□□□ 0.12
CNOT3-209ENST00000617930 IGHV1-45A0A0A0MS14 117 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 SPAARA0A1B0GVQ0 90 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 TVP23AA6NH52 213 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 LRP3O75074 770 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 SLC25A12O75746 678 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 HIST1H2ABP04908 130 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 HLA-DOBP13765 273 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 NAGAP17050 411 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 RPS27P42677 84 aaKnown RBP15.77■□□□□ 0.11
CNOT3-209ENST00000617930 LGALS3BPQ08380 585 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 SGCBQ16585 318 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 DCAF12Q5T6F0 453 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 IDNKQ5T6J7 187 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 ZNF57Q68EA5 555 aaPredicted RBP15.77■□□□□ 0.11
CNOT3-209ENST00000617930 SLC6A19Q695T7 634 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 HIST3H2AQ7L7L0 130 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 PXKQ7Z7A4 578 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 MISPQ8IVT2 679 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 PM20D2Q8IYS1 436 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 SYS1Q8N2H4 156 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 ACOT12Q8WYK0 555 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 HIST1H2ACQ93077 130 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 RNF170Q96K19 258 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 IMMP1LQ96LU5 166 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 PLSCR3Q9NRY6 295 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 PTRH2Q9Y3E5 179 aaKnown RBP15.77■□□□□ 0.11
CNOT3-209ENST00000617930 PCDHGA1Q9Y5H4 931 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 HS3ST3B1Q9Y662 390 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 ALG5Q9Y673 324 aa15.77■□□□□ 0.11
CNOT3-209ENST00000617930 GVINP1Q7Z2Y8 2422 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 PLPP3O14495 311 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 MT-ATP6P00846 226 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 FBXO45P0C2W1 286 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 COX6A1P12074 109 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 ACKR1Q16570 336 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 BTBD16Q32M84 506 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 EMC4Q5J8M3 183 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 MAMDC2Q7Z304 686 aaPredicted RBP15.76■□□□□ 0.11
CNOT3-209ENST00000617930 ZNF417Q8TAU3 575 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 ZNF519Q8TB69 540 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 TTC9Q92623 222 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 ZNF587Q96SQ5 575 aaPredicted RBP15.76■□□□□ 0.11
CNOT3-209ENST00000617930 SLA2Q9H6Q3 261 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 WDR76Q9H967 626 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 NLKQ9UBE8 527 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 EXTL2Q9UBQ6 330 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 GNG8Q9UK08 70 aa15.76■□□□□ 0.11
CNOT3-209ENST00000617930 A0A1W2PRG6 482 aa15.75■□□□□ 0.11
CNOT3-209ENST00000617930 ARHGEF9O43307 516 aa15.75■□□□□ 0.11
CNOT3-209ENST00000617930 TRIM3O75382 744 aaPredicted RBP15.75■□□□□ 0.11
CNOT3-209ENST00000617930 AKR7A3O95154 331 aa15.75■□□□□ 0.11
CNOT3-209ENST00000617930 KLK3P07288 261 aaPredicted RBP15.75■□□□□ 0.11
CNOT3-209ENST00000617930 AHCYP23526 432 aa15.75■□□□□ 0.11
CNOT3-209ENST00000617930 MTNR1BP49286 362 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms