RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 TSSK2Q96PF2 358 aa18.38■□□□□ 0.53
SDHA-220ENST00000617470 DCLRE1CQ96SD1 692 aaKnown RBP18.38■□□□□ 0.53
SDHA-220ENST00000617470 SLC25A18Q9H1K4 315 aa18.38■□□□□ 0.53
SDHA-220ENST00000617470 BABAM2Q9NXR7 383 aa18.38■□□□□ 0.53
SDHA-220ENST00000617470 SSR3Q9UNL2 185 aa18.38■□□□□ 0.53
SDHA-220ENST00000617470 LRRC3CA6NJW4 275 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 FAM166BA8MTA8 275 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 AKAP8O43823 692 aaKnown RBP18.37■□□□□ 0.53
SDHA-220ENST00000617470 BMP4P12644 408 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 CELP19835 753 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 IL11P20809 199 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 MSX1P28360 303 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 GRPRP30550 384 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 GABRA5P31644 462 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 SLC25A1P53007 311 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 PON3Q15166 354 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 BTLAQ7Z6A9 289 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 TEX19Q8NA77 164 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 OR5J2Q8NH18 312 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 NTNG2Q96CW9 530 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 TTTY12Q9BZ98 90 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 ZNF346Q9UL40 294 aaKnown RBP18.37■□□□□ 0.53
SDHA-220ENST00000617470 A3GALT2U3KPV4 340 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 E9PI62 339 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 DCTN6O00399 190 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 CBR3O75828 277 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 RFPL3SP0C7P2 107 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 GDF1P27539 372 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 APOBEC1P41238 236 aaKnown RBP18.37■□□□□ 0.53
SDHA-220ENST00000617470 KRR1Q13601 381 aaKnown RBP18.37■□□□□ 0.53
SDHA-220ENST00000617470 PLPPR5Q32ZL2 321 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 SLC25A53Q5H9E4 307 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 EMC4Q5J8M3 183 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 SLC35D3Q5M8T2 416 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 ARIH2OSQ8N7S6 290 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 ATP6V1C2Q8NEY4 427 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 POC1BQ8TC44 478 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 BORCS5Q969J3 196 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 ARL5BQ96KC2 179 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 CNN2Q99439 309 aaKnown RBP18.37■□□□□ 0.53
SDHA-220ENST00000617470 MMP27Q9H306 513 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 RPRD1BQ9NQG5 326 aaKnown RBP18.37■□□□□ 0.53
SDHA-220ENST00000617470 GRHPRQ9UBQ7 328 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 B4GALT7Q9UBV7 327 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 DKKL1Q9UK85 242 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 LHX6Q9UPM6 363 aa18.37■□□□□ 0.53
SDHA-220ENST00000617470 SFTPCP11686 197 aa18.36■□□□□ 0.53
SDHA-220ENST00000617470 PYCR1P32322 319 aa18.36■□□□□ 0.53
SDHA-220ENST00000617470 NAA10P41227 235 aaPredicted RBP18.36■□□□□ 0.53
SDHA-220ENST00000617470 ZNF41P51814 821 aaPredicted RBP18.36■□□□□ 0.53
SDHA-220ENST00000617470 BDH1Q02338 343 aa18.36■□□□□ 0.53
SDHA-220ENST00000617470 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.36■□□□□ 0.532e-7■□□□□ 9.8
SDHA-220ENST00000617470 C22orf42Q6IC83 251 aa18.36■□□□□ 0.53
SDHA-220ENST00000617470 JAZF1Q86VZ6 243 aa18.36■□□□□ 0.53
SDHA-220ENST00000617470 FADS6Q8N9I5 356 aa18.36■□□□□ 0.53
SDHA-220ENST00000617470 POMGNT2Q8NAT1 580 aa18.36■□□□□ 0.53
SDHA-220ENST00000617470 PNPLA2Q96AD5 504 aa18.36■□□□□ 0.53
SDHA-220ENST00000617470 C1GALT1C1Q96EU7 318 aa18.36■□□□□ 0.53
SDHA-220ENST00000617470 BARHL1Q9BZE3 327 aa18.36■□□□□ 0.53
SDHA-220ENST00000617470 RERGLQ9H628 205 aa18.36■□□□□ 0.53
SDHA-220ENST00000617470 FAM171A2A8MVW0 826 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 CLDN25C9JDP6 229 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 C11orf98E9PRG8 122 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 H7C1C5 153 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 PLPP3O14495 311 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 SELENOFO60613 162 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 TRAPPC6AO75865 159 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 AHSA1O95433 338 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 DPP4P27487 766 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 OR12D2P58182 307 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 LCN6P62502 163 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 PPIAP62937 165 aaKnown RBP18.35■□□□□ 0.53
SDHA-220ENST00000617470 ACTC1P68032 377 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 ACTA1P68133 377 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 FOXK1P85037 733 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 LGALS3BPQ08380 585 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 C5orf46Q6UWT4 87 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 ZFP62Q8NB50 900 aaPredicted RBP18.35■□□□□ 0.53
SDHA-220ENST00000617470 ZNF417Q8TAU3 575 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 ZNF587Q96SQ5 575 aaPredicted RBP18.35■□□□□ 0.53
SDHA-220ENST00000617470 FAM47E-STBD1D6RA91 191 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 GLCEO94923 617 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 LCN1P1Q5VSP4 162 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 GPR139Q6DWJ6 353 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 SYT14Q8NB59 555 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 OR6S1Q8NH40 331 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 C4orf36Q96KX1 117 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 ALG12Q9BV10 488 aa18.35■□□□□ 0.53
SDHA-220ENST00000617470 TRDV1A0A1B0GX56 115 aa18.34■□□□□ 0.53
SDHA-220ENST00000617470 ACOT7O00154 380 aa18.34■□□□□ 0.53
SDHA-220ENST00000617470 MAGEB4O15481 346 aaPredicted RBP18.34■□□□□ 0.53
SDHA-220ENST00000617470 ZNF208O43345 1280 aa18.34■□□□□ 0.53
SDHA-220ENST00000617470 OR2T1O43869 369 aa18.34■□□□□ 0.53
SDHA-220ENST00000617470 OR2T7P0C7T2 308 aa18.34■□□□□ 0.53
SDHA-220ENST00000617470 FGF9P31371 208 aaPredicted RBP18.34■□□□□ 0.53
SDHA-220ENST00000617470 MAGEA5P43359 124 aa18.34■□□□□ 0.53
SDHA-220ENST00000617470 SLC22A16Q86VW1 577 aa18.34■□□□□ 0.53
SDHA-220ENST00000617470 SLC35F2Q8IXU6 374 aa18.34■□□□□ 0.53
SDHA-220ENST00000617470 OR6K6Q8NGW6 343 aa18.34■□□□□ 0.53
SDHA-220ENST00000617470 OR2T27Q8NH04 317 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms