RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 DUSP5Q16690 384 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 DPY19L1Q2PZI1 675 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 KRTAP24-1Q3LI83 254 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 KLHL26Q53HC5 615 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 ZNF385BQ569K4 471 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 SLC25A53Q5H9E4 307 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.59□□□□□ -1.19
GPC6-202ENST00000617456 GPR139Q6DWJ6 353 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 ANKRD26P1Q6NSI1 321 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 CREB3L2Q70SY1 520 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 GGNQ86UU5 652 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 ZDHHC13Q8IUH4 622 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 NUDCD3Q8IVD9 361 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 CLIP4Q8N3C7 705 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 GALNT4Q8N4A0 578 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 ADAMTS15Q8TE58 950 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 ADGRG7Q96K78 797 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 MAGEB18Q96M61 343 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 OR5M11Q96RB7 305 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 OCSTAMPQ9BR26 566 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 TMEM204Q9BSN7 226 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 TMEM120AQ9BXJ8 343 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 HDHD5Q9BXW7 423 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 RTN4RQ9BZR6 473 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 NMUR2Q9GZQ4 415 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 C12orf65Q9H3J6 166 aaKnown RBP7.59□□□□□ -1.19
GPC6-202ENST00000617456 HMG20AQ9NP66 347 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 MYOZ1Q9NP98 299 aaPredicted RBP7.59□□□□□ -1.19
GPC6-202ENST00000617456 SIRT3Q9NTG7 399 aaPredicted RBP7.59□□□□□ -1.19
GPC6-202ENST00000617456 ZCCHC3Q9NUD5 404 aaKnown RBP7.59□□□□□ -1.19
GPC6-202ENST00000617456 GPATCH2Q9NW75 528 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 THUMPD1Q9NXG2 353 aaKnown RBP7.59□□□□□ -1.19
GPC6-202ENST00000617456 ING3Q9NXR8 418 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 GMPR2Q9P2T1 348 aaKnown RBP7.59□□□□□ -1.19
GPC6-202ENST00000617456 ZDHHC2Q9UIJ5 367 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 ZNF221Q9UK13 617 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 PCDHGB4Q9UN71 923 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 LIPT1Q9Y234 373 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 SNX13Q9Y5W8 968 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 ANK2Q01484 3957 aa7.59□□□□□ -1.19
GPC6-202ENST00000617456 GXYLT2A0PJZ3 443 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 SHISA8B8ZZ34 492 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 NPIPB9F8W1W9 429 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 RNASET2O00584 256 aaKnown RBP7.58□□□□□ -1.2
GPC6-202ENST00000617456 EIF1AYO14602 144 aaKnown RBP7.58□□□□□ -1.2
GPC6-202ENST00000617456 NOL3O60936 208 aaKnown RBP7.58□□□□□ -1.2
GPC6-202ENST00000617456 RAB3DO95716 219 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 IGHV4-39P01824 125 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 APOA1P02647 267 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 SERPINE1P05121 402 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 CD3EP07766 207 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 YES1P07947 543 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 OR4E1P0C645 316 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 DHRS4L1P0CG22 281 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 LAMP1P11279 417 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 PCGF2P35227 344 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 EIF1AXP47813 144 aaKnown RBP7.58□□□□□ -1.2
GPC6-202ENST00000617456 P2RX1P51575 399 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 GBX2P52951 348 aaPredicted RBP7.58□□□□□ -1.2
GPC6-202ENST00000617456 SLC18A1P54219 525 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 ESRRGP62508 458 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 ITGADQ13349 1161 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 NFYCQ13952 458 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 TRIM25Q14258 630 aaKnown RBP7.58□□□□□ -1.2
GPC6-202ENST00000617456 PTGR1Q14914 329 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 RNPS1Q15287 305 aaKnown RBP7.58□□□□□ -1.2
GPC6-202ENST00000617456 ZMYND11Q15326 602 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 PLPPR5Q32ZL2 321 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 OGFRL1Q5TC84 451 aaPredicted RBP7.58□□□□□ -1.2
GPC6-202ENST00000617456 FAM219BQ5XKK7 198 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 DHDDSQ86SQ9 333 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 ADGRG3Q86Y34 549 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 OR6F1Q8NGZ6 308 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 SMAP2Q8WU79 429 aaPredicted RBP7.58□□□□□ -1.2
GPC6-202ENST00000617456 GATAD2BQ8WXI9 593 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 ISOC1Q96CN7 298 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 MRGPRX4Q96LA9 322 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 DUSP26Q9BV47 211 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 C19orf24Q9BVV8 132 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 CDADC1Q9BWV3 514 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 BEX2Q9BXY8 128 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 AMBRA1Q9C0C7 1298 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 MMP27Q9H306 513 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 EQTNQ9NQ60 294 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 MED17Q9NVC6 651 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 FLRT3Q9NZU0 649 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 SLC17A7Q9P2U7 560 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 GDF2Q9UK05 429 aaPredicted RBP7.58□□□□□ -1.2
GPC6-202ENST00000617456 CDC42EP3Q9UKI2 254 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 NDUFAF1Q9Y375 327 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 RAP2CQ9Y3L5 183 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 RNF115Q9Y4L5 304 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 NUBP2Q9Y5Y2 271 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 PTGDR2Q9Y5Y4 395 aa7.58□□□□□ -1.2
GPC6-202ENST00000617456 IGHV4-30-2A0A087WSY4 118 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 PRSS51A0A1B0GVH4 220 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 A0A1W2PP18 115 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 TMEM233B4DJY2 109 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 RGS16O15492 202 aaPredicted RBP7.57□□□□□ -1.2
GPC6-202ENST00000617456 SSX4O60224 188 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms