RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 OR4D11Q8NGI4 311 aa4.01□□□□□ -1.77
CUL3-216ENST00000617432 PRSS3P2Q8NHM4 247 aa4.01□□□□□ -1.77
CUL3-216ENST00000617432 ST8SIA1Q92185 356 aa4.01□□□□□ -1.77
CUL3-216ENST00000617432 SPDL1Q96EA4 605 aa4.01□□□□□ -1.77
CUL3-216ENST00000617432 DTNBP1Q96EV8 351 aa4.01□□□□□ -1.77
CUL3-216ENST00000617432 LRRC46Q96FV0 321 aa4.01□□□□□ -1.77
CUL3-216ENST00000617432 ITCHQ96J02 903 aa4.01□□□□□ -1.77
CUL3-216ENST00000617432 ZNF385AQ96PM9 386 aaKnown RBP4.01□□□□□ -1.77
CUL3-216ENST00000617432 TRNT1Q96Q11 434 aaKnown RBP4.01□□□□□ -1.77
CUL3-216ENST00000617432 FOXC2Q99958 501 aa4.01□□□□□ -1.77
CUL3-216ENST00000617432 SLC39A3Q9BRY0 314 aa4.01□□□□□ -1.77
CUL3-216ENST00000617432 C1QTNF6Q9BXI9 259 aa4.01□□□□□ -1.77
CUL3-216ENST00000617432 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.01□□□□□ -1.77
CUL3-216ENST00000617432 INTS9Q9NV88 658 aaKnown RBP4.01□□□□□ -1.77
CUL3-216ENST00000617432 P2RX2Q9UBL9 471 aa4.01□□□□□ -1.77
CUL3-216ENST00000617432 CHRNA9Q9UGM1 479 aa4.01□□□□□ -1.77
CUL3-216ENST00000617432 SLC35A3Q9Y2D2 325 aa4.01□□□□□ -1.77
CUL3-216ENST00000617432 IGKV1D-42A0A075B6H8 117 aa4□□□□□ -1.77
CUL3-216ENST00000617432 A0A096LPI6 279 aa4□□□□□ -1.77
CUL3-216ENST00000617432 DPRXA6NFQ7 191 aa4□□□□□ -1.77
CUL3-216ENST00000617432 CFAP73A6NFT4 308 aa4□□□□□ -1.77
CUL3-216ENST00000617432 PRSS47A8MTI9 375 aa4□□□□□ -1.77
CUL3-216ENST00000617432 SLCO1B7G3V0H7 640 aa4□□□□□ -1.77
CUL3-216ENST00000617432 M0R3H8 397 aa4□□□□□ -1.77
CUL3-216ENST00000617432 FBP2O00757 339 aa4□□□□□ -1.77
CUL3-216ENST00000617432 CASKO14936 926 aa4□□□□□ -1.77
CUL3-216ENST00000617432 CLOCKO15516 846 aa4□□□□□ -1.77
CUL3-216ENST00000617432 EDF1O60869 148 aaKnown RBP4□□□□□ -1.77
CUL3-216ENST00000617432 NDUFS7O75251 213 aa4□□□□□ -1.77
CUL3-216ENST00000617432 PGM3O95394 542 aa4□□□□□ -1.77
CUL3-216ENST00000617432 KRT75O95678 551 aa4□□□□□ -1.77
CUL3-216ENST00000617432 AGR2O95994 175 aa4□□□□□ -1.77
CUL3-216ENST00000617432 DBIP07108 87 aaKnown RBP4□□□□□ -1.77
CUL3-216ENST00000617432 YES1P07947 543 aa4□□□□□ -1.77
CUL3-216ENST00000617432 GUSBP08236 651 aa4□□□□□ -1.77
CUL3-216ENST00000617432 SOD3P08294 240 aa4□□□□□ -1.77
CUL3-216ENST00000617432 ITGA5P08648 1049 aa4□□□□□ -1.77
CUL3-216ENST00000617432 PABPC4LP0CB38 370 aaKnown RBP4□□□□□ -1.77
CUL3-216ENST00000617432 ZCCHC18P0CG32 403 aa4□□□□□ -1.77
CUL3-216ENST00000617432 CD99P14209 185 aa4□□□□□ -1.77
CUL3-216ENST00000617432 IL7RP16871 459 aa4□□□□□ -1.77
CUL3-216ENST00000617432 TNFRSF1BP20333 461 aa4□□□□□ -1.77
CUL3-216ENST00000617432 PSMB1P20618 241 aaKnown RBP4□□□□□ -1.77
CUL3-216ENST00000617432 COX5AP20674 150 aa4□□□□□ -1.77
CUL3-216ENST00000617432 CDKN1AP38936 164 aa4□□□□□ -1.77
CUL3-216ENST00000617432 OR3A2P47893 321 aa4□□□□□ -1.77
CUL3-216ENST00000617432 MRPL19P49406 292 aaKnown RBP4□□□□□ -1.77
CUL3-216ENST00000617432 CRYBA2P53672 197 aa4□□□□□ -1.77
CUL3-216ENST00000617432 TUBA1BP68363 451 aa4□□□□□ -1.77
CUL3-216ENST00000617432 EGR4Q05215 589 aa4□□□□□ -1.77
CUL3-216ENST00000617432 LTBQ06643 244 aa4□□□□□ -1.77
CUL3-216ENST00000617432 DMTNQ08495 405 aa4□□□□□ -1.77
CUL3-216ENST00000617432 SQLEQ14534 574 aa4□□□□□ -1.77
CUL3-216ENST00000617432 NPTX1Q15818 432 aa4□□□□□ -1.77
CUL3-216ENST00000617432 ACKR1Q16570 336 aa4□□□□□ -1.77
CUL3-216ENST00000617432 LIN52Q52LA3 116 aa4□□□□□ -1.77
CUL3-216ENST00000617432 Q5PR19 223 aa4□□□□□ -1.77
CUL3-216ENST00000617432 PDSS1Q5T2R2 415 aa4□□□□□ -1.77
CUL3-216ENST00000617432 LRIF1Q5T3J3 769 aa4□□□□□ -1.77
CUL3-216ENST00000617432 GCNT6Q5T4J0 391 aa4□□□□□ -1.77
CUL3-216ENST00000617432 TSPO2Q5TGU0 170 aa4□□□□□ -1.77
CUL3-216ENST00000617432 AP1ARQ63HQ0 302 aa4□□□□□ -1.77
CUL3-216ENST00000617432 ANKRD16Q6P6B7 361 aa4□□□□□ -1.77
CUL3-216ENST00000617432 CASP12Q6UXS9 341 aa4□□□□□ -1.77
CUL3-216ENST00000617432 DLEU7Q6UYE1 221 aa4□□□□□ -1.77
CUL3-216ENST00000617432 TUBA1AQ71U36 451 aa4□□□□□ -1.77
CUL3-216ENST00000617432 BHLHA15Q7RTS1 189 aaPredicted RBP4□□□□□ -1.77
CUL3-216ENST00000617432 PTOV1Q86YD1 416 aa4□□□□□ -1.77
CUL3-216ENST00000617432 RBM45Q8IUH3 476 aaKnown RBP4□□□□□ -1.77
CUL3-216ENST00000617432 PEX5LQ8IYB4 626 aa4□□□□□ -1.77
CUL3-216ENST00000617432 TRIML2Q8N7C3 387 aa4□□□□□ -1.77
CUL3-216ENST00000617432 ZIC4Q8N9L1 334 aa4□□□□□ -1.77
CUL3-216ENST00000617432 SMYD1Q8NB12 490 aa4□□□□□ -1.77
CUL3-216ENST00000617432 MAPK1IP1LQ8NDC0 245 aa4□□□□□ -1.77
CUL3-216ENST00000617432 GPR32P1Q8NGA4 272 aa4□□□□□ -1.77
CUL3-216ENST00000617432 OR52N5Q8NH56 324 aa4□□□□□ -1.77
CUL3-216ENST00000617432 DYDC1Q8WWB3 177 aa4□□□□□ -1.77
CUL3-216ENST00000617432 IGFBPL1Q8WX77 278 aa4□□□□□ -1.77
CUL3-216ENST00000617432 AKAP1Q92667 903 aaKnown RBP eCLIP4□□□□□ -1.77
CUL3-216ENST00000617432 HTRA1Q92743 480 aa4□□□□□ -1.77
CUL3-216ENST00000617432 C3orf49Q96BT1 292 aa4□□□□□ -1.77
CUL3-216ENST00000617432 KTI12Q96EK9 354 aaPredicted RBP4□□□□□ -1.77
CUL3-216ENST00000617432 MAGEB18Q96M61 343 aa4□□□□□ -1.77
CUL3-216ENST00000617432 CCL19Q99731 98 aa4□□□□□ -1.77
CUL3-216ENST00000617432 TMEM204Q9BSN7 226 aa4□□□□□ -1.77
CUL3-216ENST00000617432 CCDC28BQ9BUN5 200 aa4□□□□□ -1.77
CUL3-216ENST00000617432 PTDSS2Q9BVG9 487 aa4□□□□□ -1.77
CUL3-216ENST00000617432 TMEM120AQ9BXJ8 343 aa4□□□□□ -1.77
CUL3-216ENST00000617432 A4GALTQ9NPC4 353 aa4□□□□□ -1.77
CUL3-216ENST00000617432 EXOSC3Q9NQT5 275 aaKnown RBP4□□□□□ -1.77
CUL3-216ENST00000617432 POLE3Q9NRF9 147 aa4□□□□□ -1.77
CUL3-216ENST00000617432 SLC7A10Q9NS82 523 aa4□□□□□ -1.77
CUL3-216ENST00000617432 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4□□□□□ -1.77
CUL3-216ENST00000617432 NDRG3Q9UGV2 375 aa4□□□□□ -1.77
CUL3-216ENST00000617432 FLVCR1Q9Y5Y0 555 aa4□□□□□ -1.77
CUL3-216ENST00000617432 SPG11Q96JI7 2443 aa4□□□□□ -1.77
CUL3-216ENST00000617432 MPDZO75970 2070 aa4□□□□□ -1.77
CUL3-216ENST00000617432 FREM1Q5H8C1 2179 aa4□□□□□ -1.77
CUL3-216ENST00000617432 IGKV3D-15A0A087WSY6 115 aa3.99□□□□□ -1.77
CUL3-216ENST00000617432 A0A0G2JND7 137 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms