RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CLN3Q13286 438 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 GLYR1Q49A26 553 aaPredicted RBP8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 C6orf183Q5T699 404 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 OR11G2Q8NGC1 345 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 OR52H1Q8NGJ2 320 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 GRPEL2Q8TAA5 225 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 CORO2AQ92828 525 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 TP63Q9H3D4 680 aaPredicted RBP8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 ETV7Q9Y603 341 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 FRS3O43559 492 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 AKR7A3O95154 331 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 IFNA7P01567 189 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 ADH6P28332 368 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 CX3CR1P49238 355 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 OR1S1Q8NH92 325 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 SLC25A44Q96H78 314 aaPredicted RBP8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 CMSS1Q9BQ75 279 aaKnown RBP8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 SYT4Q9H2B2 425 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 PLEKHA3Q9HB20 300 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 SIDT1Q9NXL6 827 aaKnown RBP8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 MGAT4CQ9UBM8 478 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 GPR52Q9Y2T5 361 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 FAM96BQ9Y3D0 163 aa8.91□□□□□ -0.98
TNFRSF9-204ENST00000615230 IGHV5-10-1A0A0J9YXX1 117 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 H3BSH0 61 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 MASP2O00187 686 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 MLLT11Q13015 90 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 IGFN1Q86VF2 1251 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 OR6T1Q8NGN1 323 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 HTRA1Q92743 480 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 LIN37Q96GY3 246 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 DCLRE1CQ96SD1 692 aaKnown RBP8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 EXOSC3Q9NQT5 275 aaKnown RBP8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 TMEM30AQ9NV96 361 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 RNF24Q9Y225 148 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 TCRBV3S1A0A5B6 114 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 B8ZZF3 427 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 LAP3P28838 519 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 FXYD6P3P58550 94 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 RRAS2P62070 204 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 LIPHQ8WWY8 451 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 C4orf36Q96KX1 117 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 GNRHR2Q96P88 292 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 NUDT16L1Q9BRJ7 211 aaKnown RBP8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 KCNIP2Q9NS61 270 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 VSX1Q9NZR4 365 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 NRG2O14511 850 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 SDHAP31040 664 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 FOXK2Q01167 660 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 MAB21L1Q13394 359 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 C22orf42Q6IC83 251 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 ZNF764Q96H86 408 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 C3orf30Q96M34 536 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 TMEM43Q9BTV4 400 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 VN1R1Q9GZP7 353 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 ZNF696Q9H7X3 374 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 ARRDC5A6NEK1 342 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 UBFD1O14562 309 aaKnown RBP8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 CXCL13O43927 109 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 TMEM127O75204 238 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 CD3EP07766 207 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 PGGT1BP53609 377 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 RUNX2Q13950 521 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 CYP4V2Q6ZWL3 525 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 PTOV1Q86YD1 416 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 SIMC1Q8NDZ2 872 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 ZCCHC14Q8WYQ9 949 aaKnown RBP8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 TNFRSF13CQ96RJ3 184 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 LMF1Q96S06 567 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 ZNF224Q9NZL3 707 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 GSKIPQ9P0R6 139 aa8.9□□□□□ -0.98
TNFRSF9-204ENST00000615230 TVP23AA6NH52 213 aa8.9□□□□□ -0.99
TNFRSF9-204ENST00000615230 CDX4O14627 284 aaPredicted RBP8.9□□□□□ -0.99
TNFRSF9-204ENST00000615230 PRAF2O60831 178 aa8.9□□□□□ -0.99
TNFRSF9-204ENST00000615230 SERPINA2P20848 420 aa8.9□□□□□ -0.99
TNFRSF9-204ENST00000615230 BTG2P78543 158 aa8.9□□□□□ -0.99
TNFRSF9-204ENST00000615230 ZNF791Q3KP31 576 aaPredicted RBP8.9□□□□□ -0.99
TNFRSF9-204ENST00000615230 TRMT12Q53H54 448 aaKnown RBP8.9□□□□□ -0.99
TNFRSF9-204ENST00000615230 EMG1Q92979 244 aaKnown RBP8.9□□□□□ -0.99
TNFRSF9-204ENST00000615230 KCTD12Q96CX2 325 aaKnown RBP8.9□□□□□ -0.99
TNFRSF9-204ENST00000615230 SLC25A31Q9H0C2 315 aa8.9□□□□□ -0.99
TNFRSF9-204ENST00000615230 TXNIPQ9H3M7 391 aa8.9□□□□□ -0.99
TNFRSF9-204ENST00000615230 MMP25Q9NPA2 562 aa8.9□□□□□ -0.99
TNFRSF9-204ENST00000615230 MYH15Q9Y2K3 1946 aa8.9□□□□□ -0.99
TNFRSF9-204ENST00000615230 GABARAPH6UMI1 98 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 ST8SIA5O15466 376 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 PRAMEF4O60810 478 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 SEC14L2O76054 403 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 GABARAPO95166 117 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 CDK1P06493 297 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 ARNTP27540 789 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 SRP14P37108 136 aaKnown RBP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 SUB1P53999 127 aaKnown RBP eCLIP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 LSRQ86X29 649 aaPredicted RBP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 LILRB2Q8N423 598 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 NOXO1Q8NFA2 376 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 OR7G2Q8NG99 324 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 OR4D6Q8NGJ1 314 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 MAELQ96JY0 434 aaKnown RBP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 QRSL1Q9H0R6 528 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms