RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 CDCP1Q9H5V8 836 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 ABRACLQ9P1F3 81 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 EPHA6Q9UF33 1036 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 MMACHCQ9Y4U1 282 aa12.73□□□□□ -0.37
PCDHGA3-202ENST00000612467 ANKRD34BA5PLL1 514 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 GATBO75879 557 aaKnown RBP12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 MMP15P51511 669 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 FAM220AQ7Z4H9 259 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 GLB1L2Q8IW92 636 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 SLC43A2Q8N370 569 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 SDR16C5Q8N3Y7 309 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 LRFN5Q96NI6 719 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 PELOQ9BRX2 385 aaKnown RBP12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 DPAGT1Q9H3H5 408 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 V9GY05 133 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 RTTNQ86VV8 2226 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 DUX1O43812 170 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 SLC16A7O60669 478 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 PNPP00491 289 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 CTLA4P16410 223 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 POU3F3P20264 500 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 ALOX5APP20292 161 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 NUDT1P36639 197 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 KIR3DL2P43630 455 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 GPLD1P80108 840 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 INSM1Q01101 510 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 ST3GAL2Q16842 350 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 ZSWIM7Q19AV6 140 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 CCDC58Q4VC31 144 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 SLC6A19Q695T7 634 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 ADGRG3Q86Y34 549 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 D2HGDHQ8N465 521 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 ZNF676Q8N7Q3 588 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 OR2G2Q8NGZ5 317 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 LILRB4Q8NHJ6 448 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 METTL21AQ8WXB1 218 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 ZNF501Q96CX3 271 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 OR1F2PQ96R84 312 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 MED28Q9H204 178 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 EXOSC3Q9NQT5 275 aaKnown RBP12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 VDAC3Q9Y277 283 aa12.72□□□□□ -0.37
PCDHGA3-202ENST00000612467 TMED7-TICAM2A0A0A6YYA0 188 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 CPED1A4D0V7 1026 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 MEIS3P1A6NDR6 274 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 AIPO00170 330 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 SLC25A12O75746 678 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 HPXP02790 462 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 SPARCP09486 303 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 EFNB2P52799 333 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 SLC25A1P53007 311 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 FMODQ06828 376 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 SNTB2Q13425 540 aaKnown RBP12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 KLF9Q13886 244 aaPredicted RBP12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 UBE2NLQ5JXB2 153 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 ZNF574Q6ZN55 896 aaPredicted RBP12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 COX15Q7KZN9 410 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 OR1N1Q8NGS0 311 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 OR2T4Q8NH00 348 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 ZNF417Q8TAU3 575 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 DEDD2Q8WXF8 326 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 TMEM106AQ96A25 262 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 CCDC74AQ96AQ1 378 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 ARL5BQ96KC2 179 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 ZNF587Q96SQ5 575 aaPredicted RBP12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 GHITMQ9H3K2 345 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 TCF7L1Q9HCS4 588 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 ING3Q9NXR8 418 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 COPS7AQ9UBW8 275 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 TMED7Q9Y3B3 224 aa12.71□□□□□ -0.37
PCDHGA3-202ENST00000612467 OR4C45A6NMZ5 311 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 ZNF593O00488 134 aaPredicted RBP12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 BCAT2O15382 392 aaPredicted RBP12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 CDK2P24941 298 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 GALNSP34059 522 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 GALK2Q01415 458 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 IL10RAQ13651 578 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 INPP5JQ15735 1006 aaPredicted RBP12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 ISXQ2M1V0 245 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 WDR38Q5JTN6 314 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 EEF1A1P5Q5VTE0 462 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 PWWP2BQ6NUJ5 590 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 SLC29A4Q7RTT9 530 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 PLXDC1Q8IUK5 500 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR11H4Q8NGC9 324 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 RPS4Y2Q8TD47 263 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 GIMAP1Q8WWP7 306 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 LIPHQ8WWY8 451 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 C8orf44Q96CB5 159 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 INTS14Q96SY0 518 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 SLC7A5P2Q9GIP4 190 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 AKIRIN1Q9H9L7 192 aaPredicted RBP12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 ELOVL3Q9HB03 270 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 MRPL22Q9NWU5 206 aaKnown RBP12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 MYEF2Q9P2K5 600 aaKnown RBP12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 CAMK2AQ9UQM7 478 aa12.71□□□□□ -0.38
PCDHGA3-202ENST00000612467 A0A1B0GX78 115 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 ALG1L2C9J202 215 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 ADAM10O14672 748 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 GPRIN2O60269 458 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 RENP00797 406 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms