RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 KIF25Q9UIL4 384 aa2.94□□□□□ -1.94
SMCHD1-213ENST00000609587 STAP1Q9ULZ2 295 aa2.94□□□□□ -1.94
SMCHD1-213ENST00000609587 DDX19BQ9UMR2 479 aa2.94□□□□□ -1.94
SMCHD1-213ENST00000609587 CFL2Q9Y281 166 aa2.94□□□□□ -1.94
SMCHD1-213ENST00000609587 ASF1AQ9Y294 204 aa2.94□□□□□ -1.94
SMCHD1-213ENST00000609587 CDH10Q9Y6N8 788 aa2.94□□□□□ -1.94
SMCHD1-213ENST00000609587 INSRP06213 1382 aa2.94□□□□□ -1.94
SMCHD1-213ENST00000609587 KANK1Q14678 1352 aa2.94□□□□□ -1.94
SMCHD1-213ENST00000609587 PLEKHG1Q9ULL1 1385 aa2.94□□□□□ -1.94
SMCHD1-213ENST00000609587 TTC21AQ8NDW8 1320 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 ADCY9O60503 1353 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 RPAP1Q9BWH6 1393 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 IGHV3OR16-13A0A075B7E8 117 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 IGKV1D-8A0A087WSZ0 117 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 TRAV26-1A0A087WT03 109 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 IGHV1OR21-1A0A087WYE8 117 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 USP27XA6NNY8 438 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 SUPT3HB4E1H0 165 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 UGT1A9O60656 530 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 UPK3AO75631 287 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 HOXB8P17481 243 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 GNA11P29992 359 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 KLK7P49862 253 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 CCNG1P51959 295 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 ARPC4P59998 168 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 POLR2GP62487 172 aaKnown RBP eCLIP2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 NCBP1Q09161 790 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 KLRB1Q12918 225 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 GRB7Q14451 532 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 NSDHLQ15738 373 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 SLC15A2Q16348 729 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 SFT2D3Q587I9 215 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 DMRTC1Q5HYR2 192 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 SAMD4BQ5PRF9 694 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 C1orf220Q5T0J3 134 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 MLIPQ5VWP3 458 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 OR4F3Q6IEY1 312 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 SLC25A25Q6KCM7 469 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 LINC00523Q86TU6 105 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 PAQR7Q86WK9 346 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 NECAB1Q8N987 351 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 FNDC5Q8NAU1 212 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 MFSD9Q8NBP5 474 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 CCDC12Q8WUD4 166 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 PAGE5Q96GU1 130 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 SLC38A2Q96QD8 506 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 CLCC1Q96S66 551 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 RNF2Q99496 336 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 NPAS2Q99743 824 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 TMEM43Q9BTV4 400 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 BBS2Q9BXC9 721 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 ANGPTL4Q9BY76 406 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 POTEKPQ9BYX7 375 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 SHCBP1LQ9BZQ2 653 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 TSGA10Q9BZW7 698 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 RBKSQ9H477 322 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 RGCCQ9H4X1 137 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 REEP4Q9H6H4 257 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 TMEM185BQ9H7F4 350 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 GEMIN7Q9H840 131 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 NANOGQ9H9S0 305 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 PLGRKTQ9HBL7 147 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 MRM3Q9HC36 420 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 STOX2Q9P2F5 926 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 RPS6KB2Q9UBS0 482 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 CDH9Q9ULB4 789 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 RPL36Q9Y3U8 105 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 THSD7BQ9C0I4 1608 aa2.93□□□□□ -1.94
SMCHD1-213ENST00000609587 CROCCQ5TZA2 2017 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 IQANK1A0A1B0GTG1 560 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 A0A1B0GUH1 482 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 PSMB11A5LHX3 300 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 A6NIZ1 184 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 PCP4L1A6NKN8 68 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 C12orf71A8MTZ7 269 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 A8MUA0 341 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 A8MXQ7 604 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 GOLGA8TH3BQL2 631 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 FOXE1O00358 373 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 MBTPS2O43462 519 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 SCN2BO60939 215 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 WBP4O75554 376 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 P04436 131 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 STAG3L2P0CL84 134 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 CCL2P13500 99 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 NPR2P20594 1047 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 PTNP21246 168 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 HTR1EP28566 365 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 QARSP47897 775 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 KCNJ3P48549 501 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 CCT3P49368 545 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 HLCSP50747 726 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 CDH6P55285 790 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 RAP1BP61224 184 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 TGFBR3Q03167 851 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 FADDQ13158 208 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 USF2Q15853 346 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 ZNF630Q2M218 657 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 HSP90AA4PQ58FG1 418 aa2.92□□□□□ -1.94
SMCHD1-213ENST00000609587 SAPCD1Q5SSQ6 148 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms