RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 ROBO4Q8WZ75 1007 aa14.68□□□□□ -0.06
PMF1-206ENST00000606952 SLC25A44Q96H78 314 aaPredicted RBP14.68□□□□□ -0.06
PMF1-206ENST00000606952 TXNDC15Q96J42 360 aa14.68□□□□□ -0.06
PMF1-206ENST00000606952 RACGAP1Q9H0H5 632 aa14.68□□□□□ -0.06
PMF1-206ENST00000606952 LUZP4Q9P127 313 aa14.68□□□□□ -0.06
PMF1-206ENST00000606952 KLHL9Q9P2J3 617 aa14.68□□□□□ -0.06
PMF1-206ENST00000606952 MOKQ9UQ07 419 aa14.68□□□□□ -0.06
PMF1-206ENST00000606952 GTF3C1Q12789 2109 aa14.68□□□□□ -0.06
PMF1-206ENST00000606952 IRGMA1A4Y4 181 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 SLC35F4A4IF30 521 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 SLC22A31A6NKX4 558 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 FAM20BO75063 409 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 IGHG1P01857 330 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 SPI1P17947 270 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 PTGER4P35408 488 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 NUDT6P53370 316 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 BIDP55957 195 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 RUNX1T1Q06455 604 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 LGALS3BPQ08380 585 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 RASGEF1BQ0VAM2 473 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 RAB40BQ12829 278 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 GGTLC2Q14390 218 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 LINC01590Q5TEZ4 76 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 EEF1A1P5Q5VTE0 462 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 CHMP1BQ7LBR1 199 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 OR2T4Q8NH00 348 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 FNDC9Q8TBE3 224 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 ABHD3Q8WU67 409 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 GGHQ92820 318 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 TMEM54Q969K7 222 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 OR2M2Q96R28 347 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 JAM3Q9BX67 310 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 PAK1IP1Q9NWT1 392 aaPredicted RBP14.67□□□□□ -0.06
PMF1-206ENST00000606952 ARHGAP21Q5T5U3 1957 aa14.67□□□□□ -0.06
PMF1-206ENST00000606952 IGLV1-36A0A0B4J1U3 117 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 CD8B2A6NJW9 211 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 ARHGEF9O43307 516 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 SERPINI2O75830 405 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 AQP8O94778 261 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 GLCEO94923 617 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 RPSAP08865 295 aaKnown RBP14.66□□□□□ -0.06
PMF1-206ENST00000606952 SMIM18P0DKX4 95 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 NR2C1P13056 603 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 PTGS2P35354 604 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 MTNR1AP48039 350 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 CLDN17P56750 224 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 TUBA4AP68366 448 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 SF3B4Q15427 424 aaKnown RBP eCLIP14.66□□□□□ -0.063e-8■■■□□ 16.3
PMF1-206ENST00000606952 ACSF3Q4G176 576 aaPredicted RBP14.66□□□□□ -0.06
PMF1-206ENST00000606952 LCN1P1Q5VSP4 162 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 RNLSQ5VYX0 342 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 B3GNT6Q6ZMB0 384 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 INTS12Q96CB8 462 aaKnown RBP14.66□□□□□ -0.06
PMF1-206ENST00000606952 SNRNP40Q96DI7 357 aaKnown RBP14.66□□□□□ -0.06
PMF1-206ENST00000606952 ZNF385AQ96PM9 386 aaKnown RBP14.66□□□□□ -0.06
PMF1-206ENST00000606952 TEAD3Q99594 435 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 SYT4Q9H2B2 425 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 MED20Q9H944 212 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 MARCH7Q9H992 704 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 CALHM2Q9HA72 323 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 FGF20Q9NP95 211 aaPredicted RBP14.66□□□□□ -0.06
PMF1-206ENST00000606952 GLRX2Q9NS18 164 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 EMC3Q9P0I2 261 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 H2AFY2Q9P0M6 372 aaPredicted RBP14.66□□□□□ -0.06
PMF1-206ENST00000606952 TNFRSF10DQ9UBN6 386 aa14.66□□□□□ -0.06
PMF1-206ENST00000606952 FOXD3Q9UJU5 478 aaPredicted RBP14.66□□□□□ -0.06
PMF1-206ENST00000606952 EXOGQ9Y2C4 368 aaKnown RBP14.66□□□□□ -0.06
PMF1-206ENST00000606952 MED12LQ86YW9 2145 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 NBEAQ8NFP9 2946 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 SLC22A20A6NK97 555 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 J3QRE1 110 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 WDR1O75083 606 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 HTR1AP08908 422 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 HOXD4P09016 255 aaPredicted RBP14.65□□□□□ -0.06
PMF1-206ENST00000606952 CLUP10909 449 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 GABRA1P14867 456 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 CRABP1P29762 137 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 POU4F2Q12837 409 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 GUSBP1Q15486 140 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 KLHL22Q53GT1 634 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 THEM4Q5T1C6 240 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 GTF2IRD2BQ6EKJ0 949 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 ZNF773Q6PK81 442 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 PRSS48Q7RTY5 328 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 GTF2IRD2Q86UP8 949 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 OR6V1Q8N148 313 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 CISD2Q8N5K1 135 aaKnown RBP14.65□□□□□ -0.06
PMF1-206ENST00000606952 ZNF540Q8NDQ6 660 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 OR9Q1Q8NGQ5 310 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 WNT2BQ93097 391 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 RHNO1Q9BSD3 238 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 COPS4Q9BT78 406 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 EMC6Q9BV81 110 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 RPRD1BQ9NQG5 326 aaKnown RBP14.65□□□□□ -0.06
PMF1-206ENST00000606952 ASB6Q9NWX5 421 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 ZNF835Q9Y2P0 537 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 PCDHGB1Q9Y5G3 927 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 DOCK7Q96N67 2140 aa14.65□□□□□ -0.06
PMF1-206ENST00000606952 BOD1L1Q8NFC6 3051 aa14.64□□□□□ -0.07
PMF1-206ENST00000606952 ZNF726A6NNF4 738 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms