RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 UFD1Q92890 307 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 TXNDC15Q96J42 360 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 RERGLQ9H628 205 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 MED29Q9NX70 200 aa19.32■□□□□ 0.68
USP6NL-204ENST00000606752 A0A0J9YW62 118 aa19.31■□□□□ 0.68
USP6NL-204ENST00000606752 ZNF814B7Z6K7 855 aa19.31■□□□□ 0.68
USP6NL-204ENST00000606752 KLRC4-KLRK1H3BQV0 150 aa19.31■□□□□ 0.68
USP6NL-204ENST00000606752 LALBAP00709 142 aa19.31■□□□□ 0.68
USP6NL-204ENST00000606752 MT-ND5P03915 603 aa19.31■□□□□ 0.68
USP6NL-204ENST00000606752 CD46P15529 392 aa19.31■□□□□ 0.68
USP6NL-204ENST00000606752 CENPAP49450 140 aa19.31■□□□□ 0.68
USP6NL-204ENST00000606752 ARG2P78540 354 aa19.31■□□□□ 0.68
USP6NL-204ENST00000606752 BDH1Q02338 343 aa19.31■□□□□ 0.68
USP6NL-204ENST00000606752 SLC16A9Q7RTY1 509 aa19.31■□□□□ 0.68
USP6NL-204ENST00000606752 GALNTL5Q7Z4T8 443 aa19.31■□□□□ 0.68
USP6NL-204ENST00000606752 NDNFQ8TB73 568 aa19.31■□□□□ 0.68
USP6NL-204ENST00000606752 CHCHD6Q9BRQ6 235 aa19.31■□□□□ 0.68
USP6NL-204ENST00000606752 ZNF703Q9H7S9 590 aaPredicted RBP19.31■□□□□ 0.68
USP6NL-204ENST00000606752 LOC100506127A0A0U1RQW1 187 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 LINC01387J3KSC0 135 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 AHCYL1O43865 530 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 SLC16A7O60669 478 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 PAX7P23759 505 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 CRABP1P29762 137 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 CAPZA2P47755 286 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 GDPGP1Q6ZNW5 385 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 GPAT4Q86UL3 456 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 KLBQ86Z14 1044 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 TIGD4Q8IY51 512 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 KCNK17Q96T54 332 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 NAA11Q9BSU3 229 aaPredicted RBP19.3■□□□□ 0.68
USP6NL-204ENST00000606752 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.3■□□□□ 0.68
USP6NL-204ENST00000606752 KLK13Q9UKR3 277 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 RASD1Q9Y272 281 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 HPNP05981 417 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 ZNF43P17038 809 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 SDHBP21912 280 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 BLVRAP53004 296 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 BIDP55957 195 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 RPS3AP61247 264 aaKnown RBP19.3■□□□□ 0.68
USP6NL-204ENST00000606752 HSF2Q03933 536 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 SSX6Q7RTT6 188 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 FDCSPQ8NFU4 85 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 ZHX1-C8orf76Q96EF9 292 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 MRPL48Q96GC5 212 aaKnown RBP19.3■□□□□ 0.68
USP6NL-204ENST00000606752 C4orf36Q96KX1 117 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 TTTY12Q9BZ98 90 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 TSPAN10Q9H1Z9 355 aaPredicted RBP19.3■□□□□ 0.68
USP6NL-204ENST00000606752 STUB1Q9UNE7 303 aa19.3■□□□□ 0.68
USP6NL-204ENST00000606752 DLL1O00548 723 aa19.29■□□□□ 0.68
USP6NL-204ENST00000606752 TNFSF11O14788 317 aa19.29■□□□□ 0.68
USP6NL-204ENST00000606752 DNPH1O43598 174 aa19.29■□□□□ 0.68
USP6NL-204ENST00000606752 GPX5O75715 221 aa19.29■□□□□ 0.68
USP6NL-204ENST00000606752 CTLA4P16410 223 aa19.29■□□□□ 0.68
USP6NL-204ENST00000606752 CRYBB2P43320 205 aa19.29■□□□□ 0.68
USP6NL-204ENST00000606752 GFRA1P56159 465 aa19.29■□□□□ 0.68
USP6NL-204ENST00000606752 ACTA2P62736 377 aa19.29■□□□□ 0.68
USP6NL-204ENST00000606752 ACTG2P63267 376 aa19.29■□□□□ 0.68
USP6NL-204ENST00000606752 ESPNLQ6ZVH7 1005 aa19.29■□□□□ 0.68
USP6NL-204ENST00000606752 MYCBPQ99417 103 aaPredicted RBP19.29■□□□□ 0.68
USP6NL-204ENST00000606752 CENPOQ9BU64 300 aa19.29■□□□□ 0.68
USP6NL-204ENST00000606752 MARCH7Q9H992 704 aa19.29■□□□□ 0.68
USP6NL-204ENST00000606752 IGLV1-36A0A0B4J1U3 117 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 PNMA8CA0A1B0GUJ8 204 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 J3QLW9 94 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 TRAF3IP2O43734 574 aaPredicted RBP19.28■□□□□ 0.68
USP6NL-204ENST00000606752 RAMP1O60894 148 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 VAMP5O95183 116 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 ZNF19P17023 458 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 UGT2B10P36537 528 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 RFC3P40938 356 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 AGFG1P52594 562 aaKnown RBP19.28■□□□□ 0.68
USP6NL-204ENST00000606752 CLDN20P56880 219 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 OR12D2P58182 307 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 RAC3P60763 192 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 FOXC1Q12948 553 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 DEFB109BQ30KR1 87 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 HDDC2Q7Z4H3 204 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 WDFY1Q8IWB7 410 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 SYS1Q8N2H4 156 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 SYT14Q8NB59 555 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 EMC6Q9BV81 110 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 TRIM36Q9NQ86 728 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 ZMIZ1Q9ULJ6 1067 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 COPS3Q9UNS2 423 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 SF3B6Q9Y3B4 125 aaKnown RBP19.28■□□□□ 0.68
USP6NL-204ENST00000606752 TVP23AA6NH52 213 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 GLSO94925 669 aaPredicted RBP19.28■□□□□ 0.68
USP6NL-204ENST00000606752 CELP19835 753 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 KLK2P20151 261 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 TGFBR1P36897 503 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 CD97P48960 835 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 MEOX1P50221 254 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 PLGLB1Q02325 96 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 GPR50Q13585 617 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 HYAL4Q2M3T9 481 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 CDONQ4KMG0 1287 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 SOWAHCQ53LP3 525 aaPredicted RBP19.28■□□□□ 0.68
USP6NL-204ENST00000606752 DNM1P34Q6PK57 102 aa19.28■□□□□ 0.68
USP6NL-204ENST00000606752 USP43Q70EL4 1123 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms