RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 STX18Q9P2W9 335 aaKnown RBP20.23■□□□□ 0.83
SNX5-217ENST00000606557 CENPBD1B2RD01 187 aa20.22■□□□□ 0.83
SNX5-217ENST00000606557 ACADSP16219 412 aa20.22■□□□□ 0.83
SNX5-217ENST00000606557 RPL4P36578 427 aaKnown RBP20.22■□□□□ 0.83
SNX5-217ENST00000606557 RPL27P61353 136 aaKnown RBP20.22■□□□□ 0.83
SNX5-217ENST00000606557 TSPAN31Q12999 210 aa20.22■□□□□ 0.83
SNX5-217ENST00000606557 HIST3H3Q16695 136 aa20.22■□□□□ 0.83
SNX5-217ENST00000606557 THSD4Q6ZMP0 1018 aa20.22■□□□□ 0.83
SNX5-217ENST00000606557 YTHDF3Q7Z739 585 aaKnown RBP20.22■□□□□ 0.83
SNX5-217ENST00000606557 DUS3LQ96G46 650 aaKnown RBP20.22■□□□□ 0.83
SNX5-217ENST00000606557 GPX7Q96SL4 187 aaPredicted RBP20.22■□□□□ 0.83
SNX5-217ENST00000606557 KATNB1Q9BVA0 655 aa20.22■□□□□ 0.83
SNX5-217ENST00000606557 POLDIP3Q9BY77 421 aaKnown RBP20.22■□□□□ 0.83
SNX5-217ENST00000606557 ULBP2Q9BZM5 246 aa20.22■□□□□ 0.83
SNX5-217ENST00000606557 NDEL1Q9GZM8 345 aa20.22■□□□□ 0.83
SNX5-217ENST00000606557 NELFAQ9H3P2 528 aa20.22■□□□□ 0.83
SNX5-217ENST00000606557 SLC17A5Q9NRA2 495 aa20.22■□□□□ 0.83
SNX5-217ENST00000606557 RASSF1Q9NS23 344 aa20.22■□□□□ 0.83
SNX5-217ENST00000606557 GLTPQ9NZD2 209 aa20.22■□□□□ 0.83
SNX5-217ENST00000606557 ZNF346Q9UL40 294 aaKnown RBP20.22■□□□□ 0.83
SNX5-217ENST00000606557 GNGT2O14610 69 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 TRMUO75648 421 aaKnown RBP20.21■□□□□ 0.83
SNX5-217ENST00000606557 HRGP04196 525 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 CD14P08571 375 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 IST1P53990 364 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 CLRN1P58418 232 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 ERVK-25P63136 954 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 ARF1P84077 181 aaKnown RBP20.21■□□□□ 0.83
SNX5-217ENST00000606557 PPA1Q15181 289 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 HIKESHIQ53FT3 197 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 SMARCD3Q6STE5 483 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 SSX8Q7RTT4 187 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 TMEM200AQ86VY9 491 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 WDR31Q8NA23 367 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 ZNF519Q8TB69 540 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 FANK1Q8TC84 345 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 HDAC2Q92769 488 aaKnown RBP20.21■□□□□ 0.83
SNX5-217ENST00000606557 BCL2L2Q92843 193 aaPredicted RBP20.21■□□□□ 0.83
SNX5-217ENST00000606557 MUCL1Q96DR8 90 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 DNAJB9Q9UBS3 223 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 ADAM18Q9Y3Q7 739 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 SLC25A15Q9Y619 301 aa20.21■□□□□ 0.83
SNX5-217ENST00000606557 TACC2O95359 2948 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 CYSRT1A8MQ03 144 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 ZNF99A8MXY4 864 aaPredicted RBP20.2■□□□□ 0.82
SNX5-217ENST00000606557 TIPRLO75663 272 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 GASTP01350 101 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 LOXP28300 417 aaPredicted RBP20.2■□□□□ 0.82
SNX5-217ENST00000606557 ACVR1BP36896 505 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 TBRG1Q3YBR2 411 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 FAM205BPQ63HN1 556 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 ALKBH2Q6NS38 261 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 ANKRD16Q6P6B7 361 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 LRFN4Q6PJG9 635 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 FAM122BQ7Z309 247 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 TMEM179BQ7Z7N9 219 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 SYT14Q8NB59 555 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 AQP11Q8NBQ7 271 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 OR52N5Q8NH56 324 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 KCNK17Q96T54 332 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 OR52D1Q9H346 318 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 NRIP3Q9NQ35 241 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 ARMC1Q9NVT9 282 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 IL20RAQ9UHF4 553 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 AMDHD2Q9Y303 409 aa20.2■□□□□ 0.82
SNX5-217ENST00000606557 A0A1W2PR80 420 aa20.19■□□□□ 0.82
SNX5-217ENST00000606557 KRTAP10-9P60411 292 aa20.19■□□□□ 0.82
SNX5-217ENST00000606557 BEX5Q5H9J7 111 aa20.19■□□□□ 0.82
SNX5-217ENST00000606557 ZNF620Q6ZNG0 422 aa20.19■□□□□ 0.82
SNX5-217ENST00000606557 ARIH2OSQ8N7S6 290 aa20.19■□□□□ 0.82
SNX5-217ENST00000606557 OR10G2Q8NGC3 310 aa20.19■□□□□ 0.82
SNX5-217ENST00000606557 MAGEE2Q8TD90 523 aaPredicted RBP20.19■□□□□ 0.82
SNX5-217ENST00000606557 GIPC3Q8TF64 312 aa20.19■□□□□ 0.82
SNX5-217ENST00000606557 NMD3Q96D46 503 aaKnown RBP20.19■□□□□ 0.82
SNX5-217ENST00000606557 DGCR6LQ9BY27 220 aa20.19■□□□□ 0.82
SNX5-217ENST00000606557 NPAP1Q9NZP6 1156 aa20.19■□□□□ 0.82
SNX5-217ENST00000606557 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.18■□□□□ 0.82
SNX5-217ENST00000606557 ARRDC5A6NEK1 342 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 A6NIZ1 184 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 SEC14L2O76054 403 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 QDPRP09417 244 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 HOXC12P31275 282 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 ZNF133P52736 654 aaPredicted RBP20.18■□□□□ 0.82
SNX5-217ENST00000606557 ACTR3P61158 418 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 RAP1BP61224 184 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 RAP1AP62834 184 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 GABPB1Q06547 395 aaPredicted RBP20.18■□□□□ 0.82
SNX5-217ENST00000606557 RFX4Q33E94 735 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 C1QTNF12Q5T7M4 302 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 DPY19L2P2Q6ZN68 376 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 ZNF627Q7L945 461 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 MCHR2Q969V1 340 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 PIK3IP1Q96FE7 263 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 Q96M85 177 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 ZNF570Q96NI8 536 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 ALG12Q9BV10 488 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 CLEC4MQ9H2X3 399 aaPredicted RBP20.18■□□□□ 0.82
SNX5-217ENST00000606557 NTN4Q9HB63 628 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 NGBQ9NPG2 151 aa20.18■□□□□ 0.82
SNX5-217ENST00000606557 GRHPRQ9UBQ7 328 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms