RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 MIER2Q8N344 545 aa14.36□□□□□ -0.11
CCDC12-210ENST00000604181 OR6N1Q8NGY5 312 aa14.36□□□□□ -0.11
CCDC12-210ENST00000604181 DNAJA4Q8WW22 397 aaPredicted RBP14.36□□□□□ -0.11
CCDC12-210ENST00000604181 ZNF416Q9BWM5 594 aa14.36□□□□□ -0.11
CCDC12-210ENST00000604181 ZNF385DQ9H6B1 395 aa14.36□□□□□ -0.11
CCDC12-210ENST00000604181 CACYBPQ9HB71 228 aaKnown RBP14.36□□□□□ -0.11
CCDC12-210ENST00000604181 KCNK9Q9NPC2 374 aa14.36□□□□□ -0.11
CCDC12-210ENST00000604181 B3GAT2Q9NPZ5 323 aa14.36□□□□□ -0.11
CCDC12-210ENST00000604181 SDR39U1Q9NRG7 319 aaPredicted RBP14.36□□□□□ -0.11
CCDC12-210ENST00000604181 MRPL39Q9NYK5 338 aaKnown RBP14.36□□□□□ -0.11
CCDC12-210ENST00000604181 SLC25A37Q9NYZ2 338 aa14.36□□□□□ -0.11
CCDC12-210ENST00000604181 ZIM2Q9NZV7 527 aa14.36□□□□□ -0.11
CCDC12-210ENST00000604181 SLAMF8Q9P0V8 285 aa14.36□□□□□ -0.11
CCDC12-210ENST00000604181 SLC7A8Q9UHI5 535 aa14.36□□□□□ -0.11
CCDC12-210ENST00000604181 A0A0B4J2E0 115 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 A0A1B0GX12 115 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 TMEM247A6NEH6 219 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 C17orf100A8MU93 164 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 UBL3O95164 117 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 SERPINA5P05154 406 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 ETS2P15036 469 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 POLR2JP52435 117 aaKnown RBP14.35□□□□□ -0.11
CCDC12-210ENST00000604181 PMS2P3Q13401 168 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 OR1Q1Q15612 314 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 NKPD1Q17RQ9 610 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 REP15Q6BDI9 236 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 ACSM5Q6NUN0 579 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 DHRS4L2Q6PKH6 230 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 MSANTD1Q6ZTZ1 278 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 ANKRD42Q8N9B4 389 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 SCAIQ8N9R8 606 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 OR6S1Q8NH40 331 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 RNF217Q8TC41 542 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 MGARPQ8TDB4 240 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 C22orf15Q8WYQ4 148 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 SH3GL3Q99963 347 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 RBM4Q9BWF3 364 aaKnown RBP14.35□□□□□ -0.11
CCDC12-210ENST00000604181 RMND5AQ9H871 391 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 THUMPD1Q9NXG2 353 aaKnown RBP14.35□□□□□ -0.11
CCDC12-210ENST00000604181 CORINQ9Y5Q5 1042 aa14.35□□□□□ -0.11
CCDC12-210ENST00000604181 IGLV3-9A0A075B6K5 115 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 C11orf98E9PRG8 122 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 IGHV2-5P01817 119 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 ARAFP10398 606 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 CSNK1A1P48729 337 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 CDH12P55289 794 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 BIDP55957 195 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 TMEM255AQ5JRV8 349 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 FAM91A1Q658Y4 838 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 RGS7BPQ6MZT1 257 aaPredicted RBP14.34□□□□□ -0.11
CCDC12-210ENST00000604181 ULK3Q6PHR2 472 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 LRFN4Q6PJG9 635 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 TMEM54Q969K7 222 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 SLC47A1Q96FL8 570 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 ASPNQ9BXN1 380 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 DENND2DQ9H6A0 471 aaPredicted RBP14.34□□□□□ -0.11
CCDC12-210ENST00000604181 HINT3Q9NQE9 182 aaKnown RBP14.34□□□□□ -0.11
CCDC12-210ENST00000604181 OPN4Q9UHM6 478 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 ZNF346Q9UL40 294 aaKnown RBP14.34□□□□□ -0.11
CCDC12-210ENST00000604181 WIPI2Q9Y4P8 454 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 PCDHGB1Q9Y5G3 927 aa14.34□□□□□ -0.11
CCDC12-210ENST00000604181 TRPC5OSA6NMA1 111 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 ZNF726A6NNF4 738 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 FSHBP01225 129 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 ZNF250P15622 560 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 AHCYP23526 432 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 RBMXP38159 391 aaKnown RBP14.33□□□□□ -0.12
CCDC12-210ENST00000604181 FADDQ13158 208 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 SCGB2A2Q13296 93 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 MELKQ14680 651 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 ZNF771Q7L3S4 317 aaPredicted RBP14.33□□□□□ -0.12
CCDC12-210ENST00000604181 PIWIL3Q7Z3Z3 882 aaKnown RBP14.33□□□□□ -0.12
CCDC12-210ENST00000604181 PXKQ7Z7A4 578 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 SLC22A24Q8N4F4 322 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 MREGQ8N565 214 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 SLC30A7Q8NEW0 376 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 C1QTNF5Q9BXJ0 243 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 CENPHQ9H3R5 247 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 IKZF5Q9H5V7 419 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 THAP1Q9NVV9 213 aa14.33□□□□□ -0.12
CCDC12-210ENST00000604181 TESQ9UGI8 421 aaKnown RBP14.33□□□□□ -0.12
CCDC12-210ENST00000604181 C5orf58C9J3I9 102 aa14.32□□□□□ -0.12
CCDC12-210ENST00000604181 TMPRSS2O15393 492 aa14.32□□□□□ -0.12
CCDC12-210ENST00000604181 CRYBB2P43320 205 aa14.32□□□□□ -0.12
CCDC12-210ENST00000604181 KLF3P57682 345 aaPredicted RBP14.32□□□□□ -0.12
CCDC12-210ENST00000604181 RGS8P57771 180 aaPredicted RBP14.32□□□□□ -0.12
CCDC12-210ENST00000604181 UBA52P62987 128 aaKnown RBP14.32□□□□□ -0.12
CCDC12-210ENST00000604181 GLO1Q04760 184 aa14.32□□□□□ -0.12
CCDC12-210ENST00000604181 USP51Q70EK9 711 aa14.32□□□□□ -0.12
CCDC12-210ENST00000604181 C10orf53Q8N6V4 93 aa14.32□□□□□ -0.12
CCDC12-210ENST00000604181 SYNPRQ8TBG9 265 aa14.32□□□□□ -0.12
CCDC12-210ENST00000604181 EPYCQ99645 322 aa14.32□□□□□ -0.12
CCDC12-210ENST00000604181 SLC52A3Q9NQ40 469 aa14.32□□□□□ -0.12
CCDC12-210ENST00000604181 TMEM38BQ9NVV0 291 aa14.32□□□□□ -0.12
CCDC12-210ENST00000604181 GLTPQ9NZD2 209 aa14.32□□□□□ -0.12
CCDC12-210ENST00000604181 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.32□□□□□ -0.12
CCDC12-210ENST00000604181 PPIAL4AQ9Y536 164 aa14.32□□□□□ -0.12
CCDC12-210ENST00000604181 V9GYY5 206 aaPredicted RBP14.32□□□□□ -0.12
CCDC12-210ENST00000604181 IGHV1-69-2A0A0G2JMI3 117 aa14.31□□□□□ -0.12
CCDC12-210ENST00000604181 A0A0G2JMP0 313 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms