RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 PMELP40967 661 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 MNDAP41218 407 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 MAGEA3P43357 314 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 DAPP51397 102 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 RAP2BP61225 183 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 RPL7AP62424 266 aaKnown RBP4.31□□□□□ -1.72
LINC01109-201ENST00000603837 TLE4Q04727 773 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 ST3GAL4Q11206 333 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 HTR4Q13639 388 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 GSG1Q2KHT4 349 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 ISXQ2M1V0 245 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 ODF4Q2M2E3 257 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 LRRTM1Q86UE6 522 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 FAM126BQ8IXS8 530 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 C2orf73Q8N5S3 287 aaPredicted RBP4.31□□□□□ -1.72
LINC01109-201ENST00000603837 PROKR2Q8NFJ6 384 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 SEMA6DQ8NFY4 1073 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 OR9Q1Q8NGQ5 310 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 ZCCHC10Q8TBK6 192 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 TMEM174Q8WUU8 243 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 MYLIPQ8WY64 445 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 CLCC1Q96S66 551 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 ZNF382Q96SR6 550 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 PITX2Q99697 317 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 SOSTQ9BQB4 213 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 VPS25Q9BRG1 176 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 TAPBPLQ9BX59 468 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 ULBP1Q9BZM6 244 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 LYRM4Q9HD34 91 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 OR2S2Q9NQN1 319 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 NLE1Q9NVX2 485 aaPredicted RBP4.31□□□□□ -1.72
LINC01109-201ENST00000603837 NPIPA1Q9UND3 350 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 LAMA3Q16787 3333 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 ANKRD12Q6UB98 2062 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 TRBV7-9A0A0J9YWB2 115 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 GFYI3L273 518 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 KDELR3O43731 214 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 OR4F21O95013 312 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 CER1O95813 267 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 IGLV1-40P01703 118 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 MELTFP08582 738 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 GIPP09681 153 aaPredicted RBP4.31□□□□□ -1.72
LINC01109-201ENST00000603837 GKN3PP0CG01 181 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 UBBP0CG47 229 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 EPHA2P29317 976 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 MAS1LP35410 378 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 ARL4AP40617 200 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 IDH2P48735 452 aaKnown RBP4.31□□□□□ -1.72
LINC01109-201ENST00000603837 MRPL19P49406 292 aaKnown RBP4.31□□□□□ -1.72
LINC01109-201ENST00000603837 EVX1P49640 407 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 RPS27AP62979 156 aaKnown RBP4.31□□□□□ -1.72
LINC01109-201ENST00000603837 UBA52P62987 128 aaKnown RBP4.31□□□□□ -1.72
LINC01109-201ENST00000603837 CSNK1G2P78368 415 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 CRADDP78560 199 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 EMX2Q04743 252 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 RBBP4Q09028 425 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 CTBP1Q13363 440 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 KIAA0141Q14154 515 aaPredicted RBP4.31□□□□□ -1.72
LINC01109-201ENST00000603837 SLC10A1Q14973 349 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 SNRNP35Q16560 246 aaKnown RBP4.31□□□□□ -1.72
LINC01109-201ENST00000603837 GXYLT1Q4G148 440 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 PRAMEF17Q5VTA0 474 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 NSUN5P2Q63ZY6 315 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 LEMD1Q68G75 181 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 OR4F3Q6IEY1 312 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 MOB3CQ70IA8 216 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 LARP4Q71RC2 724 aaKnown RBP eCLIP4.31□□□□□ -1.72
LINC01109-201ENST00000603837 ZNF534Q76KX8 674 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 MRPL21Q7Z2W9 205 aaKnown RBP4.31□□□□□ -1.72
LINC01109-201ENST00000603837 ZNF595Q8IYB9 648 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 PGBD5Q8N414 524 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 OR56A4Q8NGH8 313 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 XAGE5Q8WWM1 108 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 TEX37Q96LM6 180 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 MCEEQ96PE7 176 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 ATF6BQ99941 703 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 MYOCQ99972 504 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 SEC11CQ9BY50 192 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 MAGEB5Q9BZ81 275 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 CHRNA10Q9GZZ6 450 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 SIK2Q9H0K1 926 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 GABARAPL1Q9H0R8 117 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 DEFB129Q9H1M3 183 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 OR52A5Q9H2C5 316 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 POMKQ9H5K3 350 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 EML4Q9HC35 981 aaKnown RBP4.31□□□□□ -1.72
LINC01109-201ENST00000603837 HHATLQ9HCP6 504 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 G6PC2Q9NQR9 355 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 ASF1BQ9NVP2 202 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 NTMQ9P121 344 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 HTTP42858 3142 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 FXYD6-FXYD2A0A087WZ82 144 aa4.3□□□□□ -1.72
LINC01109-201ENST00000603837 TRAPPC13A5PLN9 417 aa4.3□□□□□ -1.72
LINC01109-201ENST00000603837 FAM90A20PA6NIJ5 464 aa4.3□□□□□ -1.72
LINC01109-201ENST00000603837 MEIS3P2A8K0S8 358 aa4.3□□□□□ -1.72
LINC01109-201ENST00000603837 NARSO43776 548 aaKnown RBP4.3□□□□□ -1.72
LINC01109-201ENST00000603837 SC5DO75845 299 aa4.3□□□□□ -1.72
LINC01109-201ENST00000603837 GLP2RO95838 553 aa4.3□□□□□ -1.72
LINC01109-201ENST00000603837 SLC25A27O95847 323 aa4.3□□□□□ -1.72
LINC01109-201ENST00000603837 VIPP01282 170 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms