RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 EVX1P49640 407 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 RAB1AP62820 205 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 CHRFAM7AQ494W8 412 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 RABL3Q5HYI8 236 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 PODNL1Q6PEZ8 512 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 TSPYL5Q86VY4 417 aaPredicted RBP13.67□□□□□ -0.22
VRK3-221ENST00000600284 WDFY1Q8IWB7 410 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 PCYOX1LQ8NBM8 494 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 NEU4Q8WWR8 484 aaPredicted RBP13.67□□□□□ -0.22
VRK3-221ENST00000600284 ZNF566Q969W8 418 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 ZNF583Q96ND8 569 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 MDFIQ99750 246 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 NOX3Q9HBY0 568 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 SAR1AQ9NR31 198 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 GID8Q9NWU2 228 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 SH3GLB1Q9Y371 365 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 CMAHPQ9Y471 501 aa13.67□□□□□ -0.22
VRK3-221ENST00000600284 TMEM129A0AVI4 362 aa13.66□□□□□ -0.22
VRK3-221ENST00000600284 MRASO14807 208 aa13.66□□□□□ -0.22
VRK3-221ENST00000600284 MT-ND1P03886 318 aa13.66□□□□□ -0.22
VRK3-221ENST00000600284 ZNF35P13682 527 aa13.66□□□□□ -0.22
VRK3-221ENST00000600284 B4GALT1P15291 398 aa13.66□□□□□ -0.22
VRK3-221ENST00000600284 GZMKP49863 264 aa13.66□□□□□ -0.22
VRK3-221ENST00000600284 SNTB2Q13425 540 aaKnown RBP13.66□□□□□ -0.22
VRK3-221ENST00000600284 REP15Q6BDI9 236 aa13.66□□□□□ -0.22
VRK3-221ENST00000600284 SPATA21Q7Z572 469 aa13.66□□□□□ -0.22
VRK3-221ENST00000600284 CARM1Q86X55 608 aa13.66□□□□□ -0.22
VRK3-221ENST00000600284 ANKS4BQ8N8V4 417 aa13.66□□□□□ -0.22
VRK3-221ENST00000600284 MEPEQ9NQ76 525 aaPredicted RBP13.66□□□□□ -0.22
VRK3-221ENST00000600284 FGFR1OP2Q9NVK5 253 aa13.66□□□□□ -0.22
VRK3-221ENST00000600284 ZNF224Q9NZL3 707 aa13.66□□□□□ -0.22
VRK3-221ENST00000600284 CDC42EP3Q9UKI2 254 aa13.66□□□□□ -0.22
VRK3-221ENST00000600284 CENPBD1B2RD01 187 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 KPNA4O00629 521 aaPredicted RBP13.65□□□□□ -0.22
VRK3-221ENST00000600284 SLC22A2O15244 555 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 MGRN1O60291 552 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 OR5F1O95221 314 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 RAB36O95755 333 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 BCL10O95999 233 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 IGHV4-31P0DP07 118 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 THRBP10828 461 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 UMPSP11172 480 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 GLRXP35754 106 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 PTDSS1P48651 473 aaKnown RBP13.65□□□□□ -0.22
VRK3-221ENST00000600284 PIGFQ07326 219 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 NRN1LQ496H8 165 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 KRT80Q6KB66 452 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 LRFN4Q6PJG9 635 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 NANOGNBQ7Z5D8 188 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 DPPA2Q7Z7J5 298 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 SVOPLQ8N434 492 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 SLC22A24Q8N4F4 322 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 LRRC17Q8N6Y2 441 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 C10orf82Q8WW14 230 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 LIPHQ8WWY8 451 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 FOXN4Q96NZ1 517 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 KCNK17Q96T54 332 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 LPAR3Q9UBY5 353 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 AP3M1Q9Y2T2 418 aa13.65□□□□□ -0.22
VRK3-221ENST00000600284 YLPM1P49750 1951 aaKnown RBP13.64□□□□□ -0.23
VRK3-221ENST00000600284 LOC100653049A0A140TA62 436 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 HTR3EA5X5Y0 456 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 FAM220BPB1ANY3 271 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 BLOC1S5-TXNDC5H3BN57 136 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 DHHO43323 396 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 KRT34O76011 436 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 FARS2O95363 451 aaKnown RBP13.64□□□□□ -0.23
VRK3-221ENST00000600284 IGHG1P01857 330 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 SERPINA5P05154 406 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 PGA4P0DJD7 388 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 PGA3P0DJD8 388 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 OR8G3PP0DMU2 310 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 FUT1P19526 365 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 GIFP27352 417 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 KDELR2P33947 212 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 GIPRP48546 466 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 TAS2R41P59536 307 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 RPS23P62266 143 aaKnown RBP13.64□□□□□ -0.23
VRK3-221ENST00000600284 GGTLC2Q14390 218 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 HIST3H3Q16695 136 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 CGB2Q6NT52 195 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 HDDC2Q7Z4H3 204 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 NKAIN4Q8IVV8 208 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 SKA3Q8IX90 412 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 MRPL24Q96A35 216 aaKnown RBP13.64□□□□□ -0.23
VRK3-221ENST00000600284 MS4A3Q96HJ5 214 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 CCDC134Q9H6E4 229 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 DYNLRB1Q9NP97 96 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 STX18Q9P2W9 335 aaKnown RBP13.64□□□□□ -0.23
VRK3-221ENST00000600284 RIMS3Q9UJD0 308 aa13.64□□□□□ -0.23
VRK3-221ENST00000600284 A0A1W2PRG6 482 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 OR7A10O76100 309 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 STAMBPO95630 424 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 QDPRP09417 244 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 TSPAN19P0C672 248 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 FAM157CP0CG43 387 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 LSP1P33241 339 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 GALK2Q01415 458 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 PIN1Q13526 163 aaPredicted RBP13.63□□□□□ -0.23
VRK3-221ENST00000600284 MELKQ14680 651 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms